Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 AV356131-201ENSMUST00000206201 750 ntBASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5874-201ENSMUST00000096101 508 ntBASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.65■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.65■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.64■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.64■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.64■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms