Protein–RNA interactions for Protein: A0A0G2JGN3

Ighv1-78, Immunoglobulin heavy variable 1-78 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-78A0A0G2JGN3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.07■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.07■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.06■□□□□ 0.16
Ighv1-78A0A0G2JGN3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.06■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-78A0A0G2JGN3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ighv1-78A0A0G2JGN3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.06■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.05■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.05■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.05■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Gm10812-201ENSMUST00000099864 546 ntBASIC16.05■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.05■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Fst-202ENSMUST00000223640 2612 ntBASIC16.05■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Mir2861-201ENSMUST00000175539 82 ntBASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Gm10698-201ENSMUST00000182663 604 ntBASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-78A0A0G2JGN3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.03■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Gm18025-201ENSMUST00000221733 862 ntBASIC16.03■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.02■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.02■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-78A0A0G2JGN3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.02■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-78A0A0G2JGN3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-78A0A0G2JGN3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.02■□□□□ 0.15
Ighv1-78A0A0G2JGN3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-78A0A0G2JGN3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms