Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7-5A0A0G2JFX6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav7-5A0A0G2JFX6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7-5A0A0G2JFX6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7-5A0A0G2JFX6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav7-5A0A0G2JFX6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7-5A0A0G2JFX6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav7-5A0A0G2JFX6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav7-5A0A0G2JFX6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav7-5A0A0G2JFX6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav7-5A0A0G2JFX6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav7-5A0A0G2JFX6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7-5A0A0G2JFX6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav7-5A0A0G2JFX6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7-5A0A0G2JFX6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7-5A0A0G2JFX6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7-5A0A0G2JFX6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7-5A0A0G2JFX6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.08□□□□□ -0.16
Trav7-5A0A0G2JFX6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Trav7-5A0A0G2JFX6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Trav7-5A0A0G2JFX6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav7-5A0A0G2JFX6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.08□□□□□ -0.16
Trav7-5A0A0G2JFX6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav7-5A0A0G2JFX6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7-5A0A0G2JFX6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav7-5A0A0G2JFX6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7-5A0A0G2JFX6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav7-5A0A0G2JFX6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7-5A0A0G2JFX6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7-5A0A0G2JFX6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7-5A0A0G2JFX6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav7-5A0A0G2JFX6 Grk6-206ENSMUST00000224995 2971 ntBASIC14.07□□□□□ -0.16
Trav7-5A0A0G2JFX6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav7-5A0A0G2JFX6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav7-5A0A0G2JFX6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7-5A0A0G2JFX6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7-5A0A0G2JFX6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7-5A0A0G2JFX6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7-5A0A0G2JFX6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav7-5A0A0G2JFX6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7-5A0A0G2JFX6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7-5A0A0G2JFX6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7-5A0A0G2JFX6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trav7-5A0A0G2JFX6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav7-5A0A0G2JFX6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav7-5A0A0G2JFX6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7-5A0A0G2JFX6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7-5A0A0G2JFX6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7-5A0A0G2JFX6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7-5A0A0G2JFX6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7-5A0A0G2JFX6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7-5A0A0G2JFX6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7-5A0A0G2JFX6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7-5A0A0G2JFX6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7-5A0A0G2JFX6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7-5A0A0G2JFX6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7-5A0A0G2JFX6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav7-5A0A0G2JFX6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7-5A0A0G2JFX6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.06□□□□□ -0.16
Trav7-5A0A0G2JFX6 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.06□□□□□ -0.16
Trav7-5A0A0G2JFX6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7-5A0A0G2JFX6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7-5A0A0G2JFX6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7-5A0A0G2JFX6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7-5A0A0G2JFX6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav7-5A0A0G2JFX6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7-5A0A0G2JFX6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7-5A0A0G2JFX6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7-5A0A0G2JFX6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7-5A0A0G2JFX6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7-5A0A0G2JFX6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7-5A0A0G2JFX6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav7-5A0A0G2JFX6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7-5A0A0G2JFX6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7-5A0A0G2JFX6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav7-5A0A0G2JFX6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7-5A0A0G2JFX6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms