Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.53□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.53□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Trav3n-3A0A0G2JEM0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.53□□□□□ -0.24
Trav3n-3A0A0G2JEM0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trav3n-3A0A0G2JEM0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.52□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav3n-3A0A0G2JEM0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Spcs1-204ENSMUST00000226782 949 ntBASIC13.52□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3n-3A0A0G2JEM0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3n-3A0A0G2JEM0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Trav3n-3A0A0G2JEM0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Trav3n-3A0A0G2JEM0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3n-3A0A0G2JEM0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms