Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trbv5A0A0B4J1G9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trbv5A0A0B4J1G9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv5A0A0B4J1G9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv5A0A0B4J1G9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trbv5A0A0B4J1G9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv5A0A0B4J1G9 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.4□□□□□ -0.1
Trbv5A0A0B4J1G9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.4□□□□□ -0.1
Trbv5A0A0B4J1G9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv5A0A0B4J1G9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv5A0A0B4J1G9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv5A0A0B4J1G9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv5A0A0B4J1G9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv5A0A0B4J1G9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv5A0A0B4J1G9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv5A0A0B4J1G9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv5A0A0B4J1G9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv5A0A0B4J1G9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv5A0A0B4J1G9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trbv5A0A0B4J1G9 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.39□□□□□ -0.11
Trbv5A0A0B4J1G9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv5A0A0B4J1G9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv5A0A0B4J1G9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.39□□□□□ -0.11
Trbv5A0A0B4J1G9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
Trbv5A0A0B4J1G9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trbv5A0A0B4J1G9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trbv5A0A0B4J1G9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv5A0A0B4J1G9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.39□□□□□ -0.11
Trbv5A0A0B4J1G9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv5A0A0B4J1G9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv5A0A0B4J1G9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trbv5A0A0B4J1G9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trbv5A0A0B4J1G9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Gm22238-201ENSMUST00000175222 88 ntBASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv5A0A0B4J1G9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv5A0A0B4J1G9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv5A0A0B4J1G9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv5A0A0B4J1G9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv5A0A0B4J1G9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv5A0A0B4J1G9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv5A0A0B4J1G9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv5A0A0B4J1G9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.37□□□□□ -0.11
Trbv5A0A0B4J1G9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trbv5A0A0B4J1G9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.37□□□□□ -0.11
Trbv5A0A0B4J1G9 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.37□□□□□ -0.11
Trbv5A0A0B4J1G9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trbv5A0A0B4J1G9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv5A0A0B4J1G9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv5A0A0B4J1G9 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.37□□□□□ -0.11
Trbv5A0A0B4J1G9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv5A0A0B4J1G9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trbv5A0A0B4J1G9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trbv5A0A0B4J1G9 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.37□□□□□ -0.11
Trbv5A0A0B4J1G9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms