Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv3A0A0A6YYE2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 Gm27801-201ENSMUST00000184174 223 ntBASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv3A0A0A6YYE2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv3A0A0A6YYE2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv3A0A0A6YYE2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.8□□□□□ -0.2
Trbv3A0A0A6YYE2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv3A0A0A6YYE2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv3A0A0A6YYE2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv3A0A0A6YYE2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv3A0A0A6YYE2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv3A0A0A6YYE2 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.8□□□□□ -0.2
Trbv3A0A0A6YYE2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trbv3A0A0A6YYE2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC13.8□□□□□ -0.2
Trbv3A0A0A6YYE2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC13.8□□□□□ -0.2
Trbv3A0A0A6YYE2 Gm7160-202ENSMUST00000188519 1027 ntBASIC13.8□□□□□ -0.2
Trbv3A0A0A6YYE2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv3A0A0A6YYE2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv3A0A0A6YYE2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv3A0A0A6YYE2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv3A0A0A6YYE2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv3A0A0A6YYE2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.8□□□□□ -0.2
Trbv3A0A0A6YYE2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv3A0A0A6YYE2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv3A0A0A6YYE2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.79□□□□□ -0.2
Trbv3A0A0A6YYE2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv3A0A0A6YYE2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv3A0A0A6YYE2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv3A0A0A6YYE2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trbv3A0A0A6YYE2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv3A0A0A6YYE2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv3A0A0A6YYE2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv3A0A0A6YYE2 Gm5522-201ENSMUST00000189483 1242 ntBASIC13.79□□□□□ -0.2
Trbv3A0A0A6YYE2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv3A0A0A6YYE2 Golgb1-201ENSMUST00000023534 498 ntBASIC13.79□□□□□ -0.2
Trbv3A0A0A6YYE2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv3A0A0A6YYE2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv3A0A0A6YYE2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv3A0A0A6YYE2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv3A0A0A6YYE2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.79□□□□□ -0.2
Trbv3A0A0A6YYE2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv3A0A0A6YYE2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.79□□□□□ -0.2
Trbv3A0A0A6YYE2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv3A0A0A6YYE2 Idnk-204ENSMUST00000226010 1898 ntBASIC13.78□□□□□ -0.2
Trbv3A0A0A6YYE2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trbv3A0A0A6YYE2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv3A0A0A6YYE2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv3A0A0A6YYE2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv3A0A0A6YYE2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv3A0A0A6YYE2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.78□□□□□ -0.2
Trbv3A0A0A6YYE2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv3A0A0A6YYE2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv3A0A0A6YYE2 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.78□□□□□ -0.2
Trbv3A0A0A6YYE2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv3A0A0A6YYE2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv3A0A0A6YYE2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv3A0A0A6YYE2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
Trbv3A0A0A6YYE2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.77□□□□□ -0.2
Trbv3A0A0A6YYE2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.77□□□□□ -0.2
Trbv3A0A0A6YYE2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Trbv3A0A0A6YYE2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Trbv3A0A0A6YYE2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv3A0A0A6YYE2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trbv3A0A0A6YYE2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.77□□□□□ -0.21
Trbv3A0A0A6YYE2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trbv3A0A0A6YYE2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv3A0A0A6YYE2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv3A0A0A6YYE2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv3A0A0A6YYE2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Trbv3A0A0A6YYE2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv3A0A0A6YYE2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trbv3A0A0A6YYE2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trbv3A0A0A6YYE2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trbv3A0A0A6YYE2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv3A0A0A6YYE2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv3A0A0A6YYE2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv3A0A0A6YYE2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv3A0A0A6YYE2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv3A0A0A6YYE2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv3A0A0A6YYE2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv3A0A0A6YYE2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms