Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Gm42642-201ENSMUST00000200683 355 ntBASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Gm10033-202ENSMUST00000211874 928 ntBASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-9A0A0A6YW37 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-9A0A0A6YW37 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Ighv1-9A0A0A6YW37 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-9A0A0A6YW37 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-9A0A0A6YW37 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-9A0A0A6YW37 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-9A0A0A6YW37 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-9A0A0A6YW37 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-9A0A0A6YW37 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-9A0A0A6YW37 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.46□□□□□ -0.25
Ighv1-9A0A0A6YW37 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.46□□□□□ -0.25
Ighv1-9A0A0A6YW37 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-9A0A0A6YW37 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.46□□□□□ -0.25
Ighv1-9A0A0A6YW37 Gm5874-201ENSMUST00000096101 508 ntBASIC13.46□□□□□ -0.25
Ighv1-9A0A0A6YW37 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-9A0A0A6YW37 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ighv1-9A0A0A6YW37 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ighv1-9A0A0A6YW37 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ighv1-9A0A0A6YW37 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ighv1-9A0A0A6YW37 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-9A0A0A6YW37 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.44□□□□□ -0.26
Ighv1-9A0A0A6YW37 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-9A0A0A6YW37 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ighv1-9A0A0A6YW37 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-9A0A0A6YW37 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-9A0A0A6YW37 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-9A0A0A6YW37 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-9A0A0A6YW37 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-9A0A0A6YW37 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ighv1-9A0A0A6YW37 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-9A0A0A6YW37 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-9A0A0A6YW37 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms