Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-5A0A075B6B9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-5A0A075B6B9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.48□□□□□ -0.09
Trav6d-5A0A075B6B9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-5A0A075B6B9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-5A0A075B6B9 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.48□□□□□ -0.09
Trav6d-5A0A075B6B9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-5A0A075B6B9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-5A0A075B6B9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-5A0A075B6B9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-5A0A075B6B9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-5A0A075B6B9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-5A0A075B6B9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-5A0A075B6B9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav6d-5A0A075B6B9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-5A0A075B6B9 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.48□□□□□ -0.09
Trav6d-5A0A075B6B9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-5A0A075B6B9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.47□□□□□ -0.09
Trav6d-5A0A075B6B9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-5A0A075B6B9 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.46□□□□□ -0.09
Trav6d-5A0A075B6B9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav6d-5A0A075B6B9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-5A0A075B6B9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav6d-5A0A075B6B9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav6d-5A0A075B6B9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-5A0A075B6B9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-5A0A075B6B9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav6d-5A0A075B6B9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-5A0A075B6B9 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.46□□□□□ -0.09
Trav6d-5A0A075B6B9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Trav6d-5A0A075B6B9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav6d-5A0A075B6B9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Trav6d-5A0A075B6B9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav6d-5A0A075B6B9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-5A0A075B6B9 Gm43173-201ENSMUST00000202246 593 ntBASIC14.46□□□□□ -0.09
Trav6d-5A0A075B6B9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.46□□□□□ -0.09
Trav6d-5A0A075B6B9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav6d-5A0A075B6B9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-5A0A075B6B9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trav6d-5A0A075B6B9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.46□□□□□ -0.1
Trav6d-5A0A075B6B9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6d-5A0A075B6B9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6d-5A0A075B6B9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6d-5A0A075B6B9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6d-5A0A075B6B9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav6d-5A0A075B6B9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-5A0A075B6B9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-5A0A075B6B9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-5A0A075B6B9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav6d-5A0A075B6B9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-5A0A075B6B9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav6d-5A0A075B6B9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-5A0A075B6B9 Gm22325-201ENSMUST00000158904 308 ntBASIC14.44□□□□□ -0.1
Trav6d-5A0A075B6B9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-5A0A075B6B9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6d-5A0A075B6B9 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.44□□□□□ -0.1
Trav6d-5A0A075B6B9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-5A0A075B6B9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav6d-5A0A075B6B9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav6d-5A0A075B6B9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms