Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-3A0A075B6A4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav12d-3A0A075B6A4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-3A0A075B6A4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-3A0A075B6A4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav12d-3A0A075B6A4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-3A0A075B6A4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-3A0A075B6A4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-3A0A075B6A4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav12d-3A0A075B6A4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-3A0A075B6A4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav12d-3A0A075B6A4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-3A0A075B6A4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-3A0A075B6A4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-3A0A075B6A4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-3A0A075B6A4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-3A0A075B6A4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-3A0A075B6A4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav12d-3A0A075B6A4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-3A0A075B6A4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-3A0A075B6A4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Trav12d-3A0A075B6A4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-3A0A075B6A4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-3A0A075B6A4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav12d-3A0A075B6A4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-3A0A075B6A4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms