Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Gm10033-202ENSMUST00000211874 928 ntBASIC14.64□□□□□ -0.07
Trav18A0A075B656 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.64□□□□□ -0.07
Trav18A0A075B656 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav18A0A075B656 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav18A0A075B656 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav18A0A075B656 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav18A0A075B656 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav18A0A075B656 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav18A0A075B656 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav18A0A075B656 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav18A0A075B656 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav18A0A075B656 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav18A0A075B656 Gm18671-201ENSMUST00000214826 683 ntBASIC14.63□□□□□ -0.07
Trav18A0A075B656 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav18A0A075B656 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav18A0A075B656 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trav18A0A075B656 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav18A0A075B656 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav18A0A075B656 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav18A0A075B656 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Trav18A0A075B656 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav18A0A075B656 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav18A0A075B656 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav18A0A075B656 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.62□□□□□ -0.07
Trav18A0A075B656 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav18A0A075B656 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav18A0A075B656 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav18A0A075B656 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav18A0A075B656 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.62□□□□□ -0.07
Trav18A0A075B656 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav18A0A075B656 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav18A0A075B656 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav18A0A075B656 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav18A0A075B656 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav18A0A075B656 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav18A0A075B656 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav18A0A075B656 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav18A0A075B656 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav18A0A075B656 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav18A0A075B656 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav18A0A075B656 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav18A0A075B656 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav18A0A075B656 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav18A0A075B656 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.61□□□□□ -0.07
Trav18A0A075B656 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav18A0A075B656 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav18A0A075B656 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav18A0A075B656 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms