Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-4A0A075B652 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-4A0A075B652 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav5-4A0A075B652 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trav5-4A0A075B652 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-4A0A075B652 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-4A0A075B652 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav5-4A0A075B652 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-4A0A075B652 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-4A0A075B652 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5-4A0A075B652 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5-4A0A075B652 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5-4A0A075B652 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5-4A0A075B652 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.94□□□□□ -0.02
Trav5-4A0A075B652 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5-4A0A075B652 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
Trav5-4A0A075B652 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.94□□□□□ -0.02
Trav5-4A0A075B652 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5-4A0A075B652 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5-4A0A075B652 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5-4A0A075B652 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5-4A0A075B652 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5-4A0A075B652 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-4A0A075B652 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-4A0A075B652 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-4A0A075B652 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav5-4A0A075B652 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-4A0A075B652 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-4A0A075B652 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-4A0A075B652 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-4A0A075B652 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav5-4A0A075B652 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-4A0A075B652 AV356131-201ENSMUST00000206201 750 ntBASIC14.93□□□□□ -0.02
Trav5-4A0A075B652 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Trav5-4A0A075B652 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-4A0A075B652 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-4A0A075B652 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-4A0A075B652 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-4A0A075B652 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-4A0A075B652 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-4A0A075B652 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-4A0A075B652 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav5-4A0A075B652 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-4A0A075B652 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-4A0A075B652 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-4A0A075B652 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-4A0A075B652 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-4A0A075B652 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.9□□□□□ -0.02
Trav5-4A0A075B652 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-4A0A075B652 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.9□□□□□ -0.02
Trav5-4A0A075B652 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.9□□□□□ -0.02
Trav5-4A0A075B652 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav5-4A0A075B652 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav5-4A0A075B652 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-4A0A075B652 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-4A0A075B652 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms