Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav12-3A0A075B648 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-3A0A075B648 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Trav12-3A0A075B648 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav12-3A0A075B648 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-3A0A075B648 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-3A0A075B648 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-3A0A075B648 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Trav12-3A0A075B648 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-3A0A075B648 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-3A0A075B648 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-3A0A075B648 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-3A0A075B648 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-3A0A075B648 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-3A0A075B648 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav12-3A0A075B648 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-3A0A075B648 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Gm16464-201ENSMUST00000117815 1095 ntBASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-3A0A075B648 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-3A0A075B648 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Etf1-202ENSMUST00000180351 108 ntBASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav12-3A0A075B648 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms