Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.22■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.22■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.21■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Gm13146-201ENSMUST00000118508 780 ntBASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Gm9988-201ENSMUST00000069786 435 ntBASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms