Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7n-4A0A075B620 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7n-4A0A075B620 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav7n-4A0A075B620 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7n-4A0A075B620 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7n-4A0A075B620 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7n-4A0A075B620 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7n-4A0A075B620 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7n-4A0A075B620 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav7n-4A0A075B620 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav7n-4A0A075B620 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7n-4A0A075B620 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7n-4A0A075B620 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7n-4A0A075B620 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav7n-4A0A075B620 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.57□□□□□ -0.24
Trav7n-4A0A075B620 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav7n-4A0A075B620 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7n-4A0A075B620 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Gm7417-201ENSMUST00000192950 473 ntBASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7n-4A0A075B620 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7n-4A0A075B620 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7n-4A0A075B620 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7n-4A0A075B620 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7n-4A0A075B620 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7n-4A0A075B620 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7n-4A0A075B620 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7n-4A0A075B620 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav7n-4A0A075B620 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7n-4A0A075B620 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7n-4A0A075B620 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7n-4A0A075B620 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
Trav7n-4A0A075B620 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7n-4A0A075B620 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7n-4A0A075B620 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7n-4A0A075B620 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7n-4A0A075B620 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7n-4A0A075B620 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7n-4A0A075B620 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7n-4A0A075B620 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7n-4A0A075B620 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7n-4A0A075B620 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7n-4A0A075B620 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7n-4A0A075B620 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7n-4A0A075B620 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav7n-4A0A075B620 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav7n-4A0A075B620 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7n-4A0A075B620 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav7n-4A0A075B620 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7n-4A0A075B620 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7n-4A0A075B620 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7n-4A0A075B620 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7n-4A0A075B620 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7n-4A0A075B620 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7n-4A0A075B620 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7n-4A0A075B620 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7n-4A0A075B620 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7n-4A0A075B620 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav7n-4A0A075B620 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7n-4A0A075B620 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7n-4A0A075B620 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav7n-4A0A075B620 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav7n-4A0A075B620 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7n-4A0A075B620 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7n-4A0A075B620 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav7n-4A0A075B620 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7n-4A0A075B620 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav7n-4A0A075B620 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7n-4A0A075B620 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7n-4A0A075B620 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7n-4A0A075B620 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7n-4A0A075B620 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.52□□□□□ -0.24
Trav7n-4A0A075B620 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7n-4A0A075B620 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trav7n-4A0A075B620 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7n-4A0A075B620 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7n-4A0A075B620 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7n-4A0A075B620 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7n-4A0A075B620 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Trav7n-4A0A075B620 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav7n-4A0A075B620 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms