Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Idnk-204ENSMUST00000226010 1898 ntBASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Trav6-1A0A075B5Z8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-1A0A075B5Z8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-1A0A075B5Z8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-1A0A075B5Z8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav6-1A0A075B5Z8 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.37□□□□□ -0.11
Trav6-1A0A075B5Z8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-1A0A075B5Z8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-1A0A075B5Z8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-1A0A075B5Z8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-1A0A075B5Z8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-1A0A075B5Z8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-1A0A075B5Z8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav6-1A0A075B5Z8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-1A0A075B5Z8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav6-1A0A075B5Z8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-1A0A075B5Z8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-1A0A075B5Z8 Reep4-203ENSMUST00000226563 1444 ntBASIC14.37□□□□□ -0.11
Trav6-1A0A075B5Z8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-1A0A075B5Z8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-1A0A075B5Z8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-1A0A075B5Z8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms