Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Sox1P53783 Lipe-203ENSMUST00000105177 1251 ntBASIC6.94□□□□□ -1.3
Sox1P53783 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox1P53783 Gm23212-201ENSMUST00000122718 60 ntBASIC6.94□□□□□ -1.3
Sox1P53783 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.94□□□□□ -1.3
Sox1P53783 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC6.94□□□□□ -1.3
Sox1P53783 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC6.94□□□□□ -1.3
Sox1P53783 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox1P53783 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.94□□□□□ -1.3
Sox1P53783 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox1P53783 Igkv17-134-201ENSMUST00000168310 348 ntBASIC6.94□□□□□ -1.3
Sox1P53783 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC6.94□□□□□ -1.3
Sox1P53783 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox1P53783 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.94□□□□□ -1.3
Sox1P53783 Gm28080-201ENSMUST00000188552 722 ntBASIC6.94□□□□□ -1.3
Sox1P53783 Gm37295-201ENSMUST00000192186 109 ntBASIC6.94□□□□□ -1.3
Sox1P53783 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC6.94□□□□□ -1.3
Sox1P53783 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox1P53783 Gm19035-202ENSMUST00000194575 959 ntBASIC6.94□□□□□ -1.3
Sox1P53783 Gm43973-201ENSMUST00000203562 210 ntBASIC6.94□□□□□ -1.3
Sox1P53783 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.94□□□□□ -1.3
Sox1P53783 LOC665443-201ENSMUST00000212284 796 ntBASIC6.94□□□□□ -1.3
Sox1P53783 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Sox1P53783 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.94□□□□□ -1.3
Sox1P53783 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.94□□□□□ -1.3
Sox1P53783 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC6.94□□□□□ -1.3
Sox1P53783 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox1P53783 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox1P53783 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox1P53783 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox1P53783 Gm37161-201ENSMUST00000191994 2697 ntBASIC6.94□□□□□ -1.3
Sox1P53783 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox1P53783 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox1P53783 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Sox1P53783 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox1P53783 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Sox1P53783 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox1P53783 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox1P53783 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Sox1P53783 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox1P53783 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox1P53783 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox1P53783 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox1P53783 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
Sox1P53783 Gm7754-201ENSMUST00000223075 2064 ntBASIC6.94□□□□□ -1.3
Sox1P53783 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox1P53783 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox1P53783 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC6.94□□□□□ -1.3
Sox1P53783 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Sox1P53783 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Sox1P53783 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC6.94□□□□□ -1.3
Sox1P53783 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox1P53783 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox1P53783 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox1P53783 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox1P53783 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox1P53783 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox1P53783 Gm44750-201ENSMUST00000206185 2223 ntBASIC6.93□□□□□ -1.3
Sox1P53783 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox1P53783 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox1P53783 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Sox1P53783 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox1P53783 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox1P53783 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox1P53783 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox1P53783 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox1P53783 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox1P53783 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox1P53783 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox1P53783 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox1P53783 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Sox1P53783 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox1P53783 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox1P53783 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Sox1P53783 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Sox1P53783 Gm43769-201ENSMUST00000201871 4323 ntBASIC6.93□□□□□ -1.3
Sox1P53783 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC6.93□□□□□ -1.3
Sox1P53783 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Sox1P53783 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Sox1P53783 Gm25795-201ENSMUST00000104421 132 ntBASIC6.93□□□□□ -1.3
Sox1P53783 Gm22714-201ENSMUST00000116894 78 ntBASIC6.93□□□□□ -1.3
Sox1P53783 Gm15001-201ENSMUST00000117657 795 ntBASIC6.93□□□□□ -1.3
Sox1P53783 Gm12710-201ENSMUST00000119011 216 ntBASIC6.93□□□□□ -1.3
Sox1P53783 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.93□□□□□ -1.3
Sox1P53783 Gm12368-201ENSMUST00000122251 434 ntBASIC6.93□□□□□ -1.3
Sox1P53783 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox1P53783 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.93□□□□□ -1.3
Sox1P53783 Gm23228-201ENSMUST00000157296 270 ntBASIC6.93□□□□□ -1.3
Sox1P53783 Gm20432-201ENSMUST00000173716 250 ntBASIC6.93□□□□□ -1.3
Sox1P53783 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox1P53783 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox1P53783 Gm28190-201ENSMUST00000189766 722 ntBASIC6.93□□□□□ -1.3
Sox1P53783 Gm28620-201ENSMUST00000190463 439 ntBASIC6.93□□□□□ -1.3
Sox1P53783 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox1P53783 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.93□□□□□ -1.3
Sox1P53783 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC6.93□□□□□ -1.3
Sox1P53783 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox1P53783 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.93□□□□□ -1.3
Sox1P53783 Gm45850-201ENSMUST00000212536 338 ntBASIC6.93□□□□□ -1.3
Sox1P53783 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms