Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim47Q8C0E3 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim47Q8C0E3 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim47Q8C0E3 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim47Q8C0E3 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Trim47Q8C0E3 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim47Q8C0E3 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim47Q8C0E3 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim47Q8C0E3 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim47Q8C0E3 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 CT010514.1-201ENSMUST00000214088 2969 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Gm45358-201ENSMUST00000209492 2305 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Mir297a-2-201ENSMUST00000103795 90 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Gm9427-201ENSMUST00000116187 651 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Mup-ps17-201ENSMUST00000120723 218 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Gm13368-201ENSMUST00000122443 430 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Gm3757-201ENSMUST00000125878 675 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Gm15899-201ENSMUST00000128586 238 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Gm24847-201ENSMUST00000158032 108 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Mir6908-201ENSMUST00000184056 63 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Gm43308-201ENSMUST00000197236 373 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Gm43228-201ENSMUST00000200735 264 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Olfr936-202ENSMUST00000216912 937 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Gm18557-201ENSMUST00000218710 433 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Gm4057-201ENSMUST00000221407 368 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 AC138765.3-201ENSMUST00000227981 423 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Gm24460-201ENSMUST00000082731 106 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Gm38243-201ENSMUST00000194737 1567 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 AC135669.2-201ENSMUST00000215636 4958 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Gm43613-201ENSMUST00000199409 1613 ntBASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim47Q8C0E3 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.16
Trim47Q8C0E3 Gm44022-201ENSMUST00000203708 5429 ntBASIC7.77□□□□□ -1.16
Trim47Q8C0E3 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC7.77□□□□□ -1.16
Trim47Q8C0E3 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
Trim47Q8C0E3 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
Trim47Q8C0E3 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Trim47Q8C0E3 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm28322-201ENSMUST00000185627 1475 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm14852-201ENSMUST00000120065 647 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm11522-201ENSMUST00000120533 176 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm14986-201ENSMUST00000121262 1002 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm22842-201ENSMUST00000157709 118 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm6264-201ENSMUST00000160802 624 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms