Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col2a1P28481 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col2a1P28481 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Col2a1P28481 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.46□□□□□ -1.38
Col2a1P28481 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col2a1P28481 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col2a1P28481 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col2a1P28481 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Col2a1P28481 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col2a1P28481 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col2a1P28481 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.46□□□□□ -1.38
Col2a1P28481 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC6.46□□□□□ -1.38
Col2a1P28481 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Col2a1P28481 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col2a1P28481 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col2a1P28481 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col2a1P28481 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC6.46□□□□□ -1.38
Col2a1P28481 Gm14472-201ENSMUST00000119815 282 ntBASIC6.46□□□□□ -1.38
Col2a1P28481 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC6.46□□□□□ -1.38
Col2a1P28481 Mir7687-201ENSMUST00000184722 59 ntBASIC6.46□□□□□ -1.38
Col2a1P28481 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC6.46□□□□□ -1.38
Col2a1P28481 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col2a1P28481 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC6.46□□□□□ -1.38
Col2a1P28481 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC6.46□□□□□ -1.38
Col2a1P28481 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col2a1P28481 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.38
Col2a1P28481 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.46□□□□□ -1.38
Col2a1P28481 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col2a1P28481 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC6.46□□□□□ -1.38
Col2a1P28481 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col2a1P28481 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.46□□□□□ -1.38
Col2a1P28481 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col2a1P28481 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col2a1P28481 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC6.46□□□□□ -1.38
Col2a1P28481 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col2a1P28481 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.45□□□□□ -1.38
Col2a1P28481 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col2a1P28481 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Col2a1P28481 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
Col2a1P28481 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col2a1P28481 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.45□□□□□ -1.38
Col2a1P28481 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col2a1P28481 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col2a1P28481 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col2a1P28481 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col2a1P28481 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.45□□□□□ -1.38
Col2a1P28481 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col2a1P28481 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Col2a1P28481 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col2a1P28481 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col2a1P28481 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col2a1P28481 Gm22273-201ENSMUST00000104040 132 ntBASIC6.45□□□□□ -1.38
Col2a1P28481 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC6.45□□□□□ -1.38
Col2a1P28481 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.45□□□□□ -1.38
Col2a1P28481 Gm3170-201ENSMUST00000168753 850 ntBASIC6.45□□□□□ -1.38
Col2a1P28481 Gm3348-201ENSMUST00000177813 850 ntBASIC6.45□□□□□ -1.38
Col2a1P28481 Gm18553-201ENSMUST00000194152 634 ntBASIC6.45□□□□□ -1.38
Col2a1P28481 Gm7825-201ENSMUST00000204046 416 ntBASIC6.45□□□□□ -1.38
Col2a1P28481 Gm45156-201ENSMUST00000207255 439 ntBASIC6.45□□□□□ -1.38
Col2a1P28481 Gm45276-201ENSMUST00000209549 1086 ntBASIC6.45□□□□□ -1.38
Col2a1P28481 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Col2a1P28481 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.45□□□□□ -1.38
Col2a1P28481 AC154452.1-201ENSMUST00000225819 241 ntBASIC6.45□□□□□ -1.38
Col2a1P28481 Gm9386-201ENSMUST00000095195 381 ntBASIC6.45□□□□□ -1.38
Col2a1P28481 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col2a1P28481 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col2a1P28481 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col2a1P28481 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Col2a1P28481 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col2a1P28481 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Col2a1P28481 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col2a1P28481 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col2a1P28481 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col2a1P28481 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.44□□□□□ -1.38
Col2a1P28481 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.44□□□□□ -1.38
Col2a1P28481 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col2a1P28481 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col2a1P28481 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col2a1P28481 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col2a1P28481 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col2a1P28481 Lipe-203ENSMUST00000105177 1251 ntBASIC6.44□□□□□ -1.38
Col2a1P28481 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.44□□□□□ -1.38
Col2a1P28481 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC6.44□□□□□ -1.38
Col2a1P28481 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col2a1P28481 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col2a1P28481 Gm25430-201ENSMUST00000157614 289 ntBASIC6.44□□□□□ -1.38
Col2a1P28481 Gm15812-201ENSMUST00000162331 748 ntBASIC6.44□□□□□ -1.38
Col2a1P28481 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col2a1P28481 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC6.44□□□□□ -1.38
Col2a1P28481 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
Col2a1P28481 Gm2950-201ENSMUST00000185530 520 ntBASIC6.44□□□□□ -1.38
Col2a1P28481 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col2a1P28481 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC6.44□□□□□ -1.38
Col2a1P28481 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC6.44□□□□□ -1.38
Col2a1P28481 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC6.44□□□□□ -1.38
Col2a1P28481 Gm44184-201ENSMUST00000204290 132 ntBASIC6.44□□□□□ -1.38
Col2a1P28481 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col2a1P28481 Thoc7-209ENSMUST00000225325 765 ntBASIC6.44□□□□□ -1.38
Col2a1P28481 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col2a1P28481 AC154323.1-201ENSMUST00000228329 1231 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms