Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm26078-201ENSMUST00000104067 128 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm12106-201ENSMUST00000116006 1200 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm11893-201ENSMUST00000117829 491 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm13740-201ENSMUST00000120590 310 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm13593-201ENSMUST00000121329 692 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm23954-201ENSMUST00000157213 353 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm24236-201ENSMUST00000157794 134 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm23224-201ENSMUST00000158122 271 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm24741-201ENSMUST00000158857 106 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm28061-201ENSMUST00000189085 807 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm18865-201ENSMUST00000193011 1171 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm33242-201ENSMUST00000212130 1057 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm18413-201ENSMUST00000221573 655 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm2614-201ENSMUST00000223227 403 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scrt1Q99M85 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
Scrt1Q99M85 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.17□□□□□ -1.58
Scrt1Q99M85 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Scrt1Q99M85 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.17□□□□□ -1.58
Scrt1Q99M85 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scrt1Q99M85 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scrt1Q99M85 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Scrt1Q99M85 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.17□□□□□ -1.58
Scrt1Q99M85 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Scrt1Q99M85 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scrt1Q99M85 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scrt1Q99M85 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Scrt1Q99M85 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Scrt1Q99M85 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC5.17□□□□□ -1.58
Scrt1Q99M85 Gm14512-201ENSMUST00000117924 230 ntBASIC5.17□□□□□ -1.58
Scrt1Q99M85 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Scrt1Q99M85 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.17□□□□□ -1.58
Scrt1Q99M85 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.17□□□□□ -1.58
Scrt1Q99M85 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Scrt1Q99M85 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.17□□□□□ -1.58
Scrt1Q99M85 Gm3053-201ENSMUST00000161709 616 ntBASIC5.17□□□□□ -1.58
Scrt1Q99M85 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Scrt1Q99M85 Gm25025-201ENSMUST00000175018 111 ntBASIC5.17□□□□□ -1.58
Scrt1Q99M85 Mirt2-201ENSMUST00000175179 285 ntBASIC5.17□□□□□ -1.58
Scrt1Q99M85 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Scrt1Q99M85 Gm27887-201ENSMUST00000184367 102 ntBASIC5.17□□□□□ -1.58
Scrt1Q99M85 Gm29454-201ENSMUST00000190805 393 ntBASIC5.17□□□□□ -1.58
Scrt1Q99M85 Gm37103-201ENSMUST00000191830 115 ntBASIC5.17□□□□□ -1.58
Scrt1Q99M85 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Scrt1Q99M85 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms