Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd9P28357 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm14670-201ENSMUST00000117327 337 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm5255-201ENSMUST00000120125 642 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm11533-201ENSMUST00000120287 477 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm11848-201ENSMUST00000121207 973 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm14787-201ENSMUST00000121236 388 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm15367-201ENSMUST00000122398 1016 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm26255-201ENSMUST00000122492 103 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.81□□□□□ -1.32
Hoxd9P28357 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm25902-201ENSMUST00000158493 318 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm18848-201ENSMUST00000182069 792 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm27964-201ENSMUST00000185195 62 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm18875-201ENSMUST00000188563 882 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd9P28357 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm43897-201ENSMUST00000204019 309 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm44258-201ENSMUST00000204925 301 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm45226-201ENSMUST00000206602 288 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm18557-201ENSMUST00000218710 433 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm4057-201ENSMUST00000221407 368 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC6.81□□□□□ -1.32
Hoxd9P28357 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC6.81□□□□□ -1.32
Hoxd9P28357 CT030182.4-201ENSMUST00000223647 645 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 AC146601.1-201ENSMUST00000227910 905 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd9P28357 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd9P28357 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd9P28357 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd9P28357 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd9P28357 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd9P28357 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Hoxd9P28357 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd9P28357 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd9P28357 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd9P28357 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Hoxd9P28357 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd9P28357 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.81□□□□□ -1.32
Hoxd9P28357 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd9P28357 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Hoxd9P28357 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
Hoxd9P28357 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.8□□□□□ -1.32
Hoxd9P28357 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC6.8□□□□□ -1.32
Hoxd9P28357 Gm28322-201ENSMUST00000185627 1475 ntBASIC6.8□□□□□ -1.32
Hoxd9P28357 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd9P28357 Gm45819-201ENSMUST00000210940 1751 ntBASIC6.8□□□□□ -1.32
Hoxd9P28357 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.8□□□□□ -1.32
Hoxd9P28357 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd9P28357 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd9P28357 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Hoxd9P28357 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Hoxd9P28357 Gm22591-201ENSMUST00000104243 106 ntBASIC6.8□□□□□ -1.32
Hoxd9P28357 Gm25631-201ENSMUST00000104390 130 ntBASIC6.8□□□□□ -1.32
Hoxd9P28357 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Hoxd9P28357 Gm17170-201ENSMUST00000112785 316 ntBASIC6.8□□□□□ -1.32
Hoxd9P28357 Gm16216-201ENSMUST00000118970 1111 ntBASIC6.8□□□□□ -1.32
Hoxd9P28357 Gm2199-201ENSMUST00000119065 874 ntBASIC6.8□□□□□ -1.32
Hoxd9P28357 Gm13940-201ENSMUST00000121023 301 ntBASIC6.8□□□□□ -1.32
Hoxd9P28357 Gm15899-201ENSMUST00000128586 238 ntBASIC6.8□□□□□ -1.32
Hoxd9P28357 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.8□□□□□ -1.32
Hoxd9P28357 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd9P28357 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd9P28357 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.8□□□□□ -1.32
Hoxd9P28357 Gm7420-201ENSMUST00000162836 842 ntBASIC6.8□□□□□ -1.32
Hoxd9P28357 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd9P28357 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd9P28357 Gm19815-201ENSMUST00000175818 335 ntBASIC6.8□□□□□ -1.32
Hoxd9P28357 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC6.8□□□□□ -1.32
Hoxd9P28357 Gm26179-201ENSMUST00000177723 132 ntBASIC6.8□□□□□ -1.32
Hoxd9P28357 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd9P28357 Gm9167-201ENSMUST00000182469 962 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms