Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.68□□□□□ -1.5
Sox3P53784 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox3P53784 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sox3P53784 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Sox3P53784 Gm5139-201ENSMUST00000175943 249 ntBASIC5.68□□□□□ -1.5
Sox3P53784 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox3P53784 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC5.68□□□□□ -1.5
Sox3P53784 Gm28061-201ENSMUST00000189085 807 ntBASIC5.68□□□□□ -1.5
Sox3P53784 Gm43148-201ENSMUST00000198237 520 ntBASIC5.68□□□□□ -1.5
Sox3P53784 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox3P53784 Mir219c-201ENSMUST00000199860 60 ntBASIC5.68□□□□□ -1.5
Sox3P53784 Gm19182-201ENSMUST00000207139 577 ntBASIC5.68□□□□□ -1.5
Sox3P53784 Gm45473-201ENSMUST00000211452 616 ntBASIC5.68□□□□□ -1.5
Sox3P53784 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sox3P53784 Gm6049-201ENSMUST00000222369 458 ntBASIC5.68□□□□□ -1.5
Sox3P53784 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox3P53784 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sox3P53784 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Sox3P53784 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Sox3P53784 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Sox3P53784 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC5.68□□□□□ -1.5
Sox3P53784 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC5.68□□□□□ -1.5
Sox3P53784 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox3P53784 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox3P53784 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.68□□□□□ -1.5
Sox3P53784 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox3P53784 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.68□□□□□ -1.5
Sox3P53784 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox3P53784 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox3P53784 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sox3P53784 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.67□□□□□ -1.5
Sox3P53784 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sox3P53784 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox3P53784 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox3P53784 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sox3P53784 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.67□□□□□ -1.5
Sox3P53784 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sox3P53784 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
Sox3P53784 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox3P53784 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.67□□□□□ -1.5
Sox3P53784 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.67□□□□□ -1.5
Sox3P53784 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.67□□□□□ -1.5
Sox3P53784 Gm22592-201ENSMUST00000104242 131 ntBASIC5.67□□□□□ -1.5
Sox3P53784 Gm24989-201ENSMUST00000104461 88 ntBASIC5.67□□□□□ -1.5
Sox3P53784 Gm14382-201ENSMUST00000117374 437 ntBASIC5.67□□□□□ -1.5
Sox3P53784 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC5.67□□□□□ -1.5
Sox3P53784 Gm12734-201ENSMUST00000120228 948 ntBASIC5.67□□□□□ -1.5
Sox3P53784 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sox3P53784 Gm26372-201ENSMUST00000157831 236 ntBASIC5.67□□□□□ -1.5
Sox3P53784 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.67□□□□□ -1.5
Sox3P53784 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Sox3P53784 Esd-ps-201ENSMUST00000170684 847 ntBASIC5.67□□□□□ -1.5
Sox3P53784 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Sox3P53784 Mir6362-201ENSMUST00000184329 107 ntBASIC5.67□□□□□ -1.5
Sox3P53784 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox3P53784 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sox3P53784 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox3P53784 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC5.67□□□□□ -1.5
Sox3P53784 Gm19189-201ENSMUST00000221689 754 ntBASIC5.67□□□□□ -1.5
Sox3P53784 Gm6474-201ENSMUST00000223250 699 ntBASIC5.67□□□□□ -1.5
Sox3P53784 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.67□□□□□ -1.5
Sox3P53784 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sox3P53784 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Sox3P53784 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.67□□□□□ -1.5
Sox3P53784 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox3P53784 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sox3P53784 Mir133b-201ENSMUST00000083546 119 ntBASIC5.67□□□□□ -1.5
Sox3P53784 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.67□□□□□ -1.5
Sox3P53784 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sox3P53784 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sox3P53784 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sox3P53784 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sox3P53784 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.67□□□□□ -1.5
Sox3P53784 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.67□□□□□ -1.5
Sox3P53784 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sox3P53784 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.67□□□□□ -1.5
Sox3P53784 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox3P53784 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox3P53784 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sox3P53784 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.66□□□□□ -1.5
Sox3P53784 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox3P53784 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox3P53784 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.66□□□□□ -1.5
Sox3P53784 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox3P53784 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox3P53784 Gm46199-201ENSMUST00000220373 1693 ntBASIC5.66□□□□□ -1.5
Sox3P53784 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.66□□□□□ -1.5
Sox3P53784 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox3P53784 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox3P53784 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.66□□□□□ -1.5
Sox3P53784 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sox3P53784 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.66□□□□□ -1.5
Sox3P53784 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox3P53784 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox3P53784 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.66□□□□□ -1.5
Sox3P53784 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.66□□□□□ -1.5
Sox3P53784 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC5.66□□□□□ -1.5
Sox3P53784 Gm22895-201ENSMUST00000157508 308 ntBASIC5.66□□□□□ -1.5
Sox3P53784 Gm15838-201ENSMUST00000161575 180 ntBASIC5.66□□□□□ -1.5
Sox3P53784 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms