Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC4.87□□□□□ -1.63
Cdx1P18111 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.87□□□□□ -1.63
Cdx1P18111 Gm6575-201ENSMUST00000222946 697 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 AC165260.1-201ENSMUST00000224127 683 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 AC156559.2-201ENSMUST00000224403 384 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx1P18111 Mir138-1-201ENSMUST00000083480 99 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx1P18111 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx1P18111 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
Cdx1P18111 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx1P18111 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx1P18111 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx1P18111 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx1P18111 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
Cdx1P18111 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Cdx1P18111 AC192616.2-201ENSMUST00000221482 3841 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC4.86□□□□□ -1.63
Cdx1P18111 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Cdx1P18111 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Cdx1P18111 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Cdx1P18111 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Cdx1P18111 Gm42702-201ENSMUST00000199515 4217 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx1P18111 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx1P18111 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Cdx1P18111 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Cdx1P18111 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx1P18111 Gm24888-201ENSMUST00000104387 130 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC4.86□□□□□ -1.63
Cdx1P18111 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC4.86□□□□□ -1.63
Cdx1P18111 Gm14790-201ENSMUST00000117760 1293 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Cdx1P18111 Gm11212-201ENSMUST00000118337 618 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 Gm13772-201ENSMUST00000118431 317 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 Gm13755-201ENSMUST00000118509 305 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 Gm14375-201ENSMUST00000119490 855 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx1P18111 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC4.86□□□□□ -1.63
Cdx1P18111 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx1P18111 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC4.86□□□□□ -1.63
Cdx1P18111 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx1P18111 Gm23259-201ENSMUST00000158318 303 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Cdx1P18111 Gm5456-201ENSMUST00000170706 844 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 Gm17152-201ENSMUST00000172430 535 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 Gm22923-201ENSMUST00000174952 110 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 Gm17045-201ENSMUST00000178600 844 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx1P18111 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx1P18111 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Cdx1P18111 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC4.86□□□□□ -1.63
Cdx1P18111 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx1P18111 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx1P18111 Gm44538-201ENSMUST00000205615 348 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC4.86□□□□□ -1.63
Cdx1P18111 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC4.86□□□□□ -1.63
Cdx1P18111 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
Cdx1P18111 Gm18996-201ENSMUST00000214851 755 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 Gm3785-201ENSMUST00000221000 202 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx1P18111 AC150661.1-201ENSMUST00000222563 495 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 CT030645.2-201ENSMUST00000224321 1012 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 Cma2-202ENSMUST00000228263 857 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.86□□□□□ -1.63
Cdx1P18111 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx1P18111 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx1P18111 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx1P18111 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx1P18111 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx1P18111 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC4.86□□□□□ -1.63
Cdx1P18111 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx1P18111 Gm1966-201ENSMUST00000184540 7293 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx1P18111 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cdx1P18111 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cdx1P18111 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx1P18111 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx1P18111 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC4.85□□□□□ -1.63
Cdx1P18111 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx1P18111 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cdx1P18111 Gm22374-201ENSMUST00000104583 132 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
Cdx1P18111 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cdx1P18111 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Gm10241-201ENSMUST00000117664 286 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx1P18111 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC4.85□□□□□ -1.63
Cdx1P18111 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC4.85□□□□□ -1.63
Cdx1P18111 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx1P18111 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx1P18111 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC4.85□□□□□ -1.63
Cdx1P18111 Cfhr3-201ENSMUST00000170441 1022 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms