Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm2399-201ENSMUST00000104944 225 ntBASIC17.96■□□□□ 0.47
H2afb2S4R1M3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb2S4R1M3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.96■□□□□ 0.47
H2afb2S4R1M3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.96■□□□□ 0.47
H2afb2S4R1M3 Rab3c-203ENSMUST00000224180 967 ntBASIC17.96■□□□□ 0.47
H2afb2S4R1M3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb2S4R1M3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb2S4R1M3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb2S4R1M3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
H2afb2S4R1M3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
H2afb2S4R1M3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.96■□□□□ 0.46
H2afb2S4R1M3 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.95■□□□□ 0.46
H2afb2S4R1M3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb2S4R1M3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb2S4R1M3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb2S4R1M3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb2S4R1M3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb2S4R1M3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.95■□□□□ 0.46
H2afb2S4R1M3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
H2afb2S4R1M3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.95■□□□□ 0.46
H2afb2S4R1M3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.95■□□□□ 0.46
H2afb2S4R1M3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
H2afb2S4R1M3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
H2afb2S4R1M3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb2S4R1M3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
H2afb2S4R1M3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb2S4R1M3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb2S4R1M3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
H2afb2S4R1M3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.95■□□□□ 0.46
H2afb2S4R1M3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb2S4R1M3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
H2afb2S4R1M3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb2S4R1M3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb2S4R1M3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb2S4R1M3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb2S4R1M3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
H2afb2S4R1M3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb2S4R1M3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb2S4R1M3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.94■□□□□ 0.46
H2afb2S4R1M3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.94■□□□□ 0.46
H2afb2S4R1M3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
H2afb2S4R1M3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
H2afb2S4R1M3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb2S4R1M3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb2S4R1M3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb2S4R1M3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb2S4R1M3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
H2afb2S4R1M3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
H2afb2S4R1M3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb2S4R1M3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb2S4R1M3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb2S4R1M3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
H2afb2S4R1M3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb2S4R1M3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.93■□□□□ 0.46
H2afb2S4R1M3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
H2afb2S4R1M3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb2S4R1M3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb2S4R1M3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
H2afb2S4R1M3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb2S4R1M3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb2S4R1M3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
H2afb2S4R1M3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb2S4R1M3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
H2afb2S4R1M3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb2S4R1M3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb2S4R1M3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb2S4R1M3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb2S4R1M3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb2S4R1M3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb2S4R1M3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb2S4R1M3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb2S4R1M3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb2S4R1M3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.92■□□□□ 0.46
H2afb2S4R1M3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
H2afb2S4R1M3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb2S4R1M3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
H2afb2S4R1M3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb2S4R1M3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb2S4R1M3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.92■□□□□ 0.46
H2afb2S4R1M3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb2S4R1M3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb2S4R1M3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
H2afb2S4R1M3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb2S4R1M3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.91■□□□□ 0.46
H2afb2S4R1M3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb2S4R1M3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb2S4R1M3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb2S4R1M3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb2S4R1M3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb2S4R1M3 Gm38285-201ENSMUST00000192928 922 ntBASIC17.91■□□□□ 0.46
H2afb2S4R1M3 Gm5408-201ENSMUST00000197998 747 ntBASIC17.91■□□□□ 0.46
H2afb2S4R1M3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
H2afb2S4R1M3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb2S4R1M3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb2S4R1M3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb2S4R1M3 Gm10602-201ENSMUST00000098239 609 ntBASIC17.91■□□□□ 0.46
H2afb2S4R1M3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb2S4R1M3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
H2afb2S4R1M3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb2S4R1M3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms