Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CcsQ9WU84 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CcsQ9WU84 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.92□□□□□ -0.18
CcsQ9WU84 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CcsQ9WU84 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CcsQ9WU84 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.92□□□□□ -0.18
CcsQ9WU84 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CcsQ9WU84 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CcsQ9WU84 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.92□□□□□ -0.18
CcsQ9WU84 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CcsQ9WU84 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CcsQ9WU84 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CcsQ9WU84 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CcsQ9WU84 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CcsQ9WU84 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CcsQ9WU84 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.92□□□□□ -0.18
CcsQ9WU84 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CcsQ9WU84 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.92□□□□□ -0.18
CcsQ9WU84 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CcsQ9WU84 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CcsQ9WU84 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CcsQ9WU84 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CcsQ9WU84 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CcsQ9WU84 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CcsQ9WU84 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.91□□□□□ -0.18
CcsQ9WU84 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CcsQ9WU84 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CcsQ9WU84 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CcsQ9WU84 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.91□□□□□ -0.18
CcsQ9WU84 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CcsQ9WU84 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CcsQ9WU84 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CcsQ9WU84 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CcsQ9WU84 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.91□□□□□ -0.18
CcsQ9WU84 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CcsQ9WU84 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CcsQ9WU84 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CcsQ9WU84 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CcsQ9WU84 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
CcsQ9WU84 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC13.91□□□□□ -0.18
CcsQ9WU84 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CcsQ9WU84 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CcsQ9WU84 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CcsQ9WU84 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CcsQ9WU84 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CcsQ9WU84 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
CcsQ9WU84 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC13.9□□□□□ -0.18
CcsQ9WU84 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.9□□□□□ -0.18
CcsQ9WU84 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CcsQ9WU84 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CcsQ9WU84 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CcsQ9WU84 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC13.9□□□□□ -0.18
CcsQ9WU84 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CcsQ9WU84 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CcsQ9WU84 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CcsQ9WU84 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CcsQ9WU84 Smad6-203ENSMUST00000179458 273 ntBASIC13.9□□□□□ -0.18
CcsQ9WU84 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CcsQ9WU84 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC13.9□□□□□ -0.18
CcsQ9WU84 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CcsQ9WU84 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CcsQ9WU84 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CcsQ9WU84 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CcsQ9WU84 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CcsQ9WU84 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CcsQ9WU84 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CcsQ9WU84 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CcsQ9WU84 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
CcsQ9WU84 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CcsQ9WU84 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
CcsQ9WU84 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CcsQ9WU84 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CcsQ9WU84 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CcsQ9WU84 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CcsQ9WU84 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.89□□□□□ -0.19
CcsQ9WU84 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CcsQ9WU84 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CcsQ9WU84 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CcsQ9WU84 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CcsQ9WU84 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.89□□□□□ -0.19
CcsQ9WU84 Gm18284-201ENSMUST00000172604 624 ntBASIC13.89□□□□□ -0.19
CcsQ9WU84 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CcsQ9WU84 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC13.89□□□□□ -0.19
CcsQ9WU84 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CcsQ9WU84 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CcsQ9WU84 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CcsQ9WU84 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CcsQ9WU84 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CcsQ9WU84 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CcsQ9WU84 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CcsQ9WU84 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CcsQ9WU84 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CcsQ9WU84 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CcsQ9WU84 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CcsQ9WU84 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CcsQ9WU84 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.88□□□□□ -0.19
CcsQ9WU84 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CcsQ9WU84 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CcsQ9WU84 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CcsQ9WU84 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms