Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Gm33142-201ENSMUST00000193913 867 ntBASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col13a1Q9R1N9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col13a1Q9R1N9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col13a1Q9R1N9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col13a1Q9R1N9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col13a1Q9R1N9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col13a1Q9R1N9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col13a1Q9R1N9 AA414768-201ENSMUST00000121924 1257 ntBASIC15.21■□□□□ 0.03
Col13a1Q9R1N9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col13a1Q9R1N9 Ank2-226ENSMUST00000189368 339 ntBASIC15.21■□□□□ 0.03
Col13a1Q9R1N9 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.21■□□□□ 0.03
Col13a1Q9R1N9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col13a1Q9R1N9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col13a1Q9R1N9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col13a1Q9R1N9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col13a1Q9R1N9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col13a1Q9R1N9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col13a1Q9R1N9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col13a1Q9R1N9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col13a1Q9R1N9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Col13a1Q9R1N9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Col13a1Q9R1N9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col13a1Q9R1N9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col13a1Q9R1N9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col13a1Q9R1N9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.18■□□□□ 0.02
Col13a1Q9R1N9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col13a1Q9R1N9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col13a1Q9R1N9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Col13a1Q9R1N9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col13a1Q9R1N9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col13a1Q9R1N9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col13a1Q9R1N9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col13a1Q9R1N9 Gm14859-201ENSMUST00000117752 357 ntBASIC15.18■□□□□ 0.02
Col13a1Q9R1N9 Gm7461-201ENSMUST00000058918 827 ntBASIC15.18■□□□□ 0.02
Col13a1Q9R1N9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col13a1Q9R1N9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Col13a1Q9R1N9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col13a1Q9R1N9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col13a1Q9R1N9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Col13a1Q9R1N9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms