Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim44Q9QXA7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim44Q9QXA7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.81■□□□□ 0.92
Trim44Q9QXA7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim44Q9QXA7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim44Q9QXA7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Trim44Q9QXA7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim44Q9QXA7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim44Q9QXA7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim44Q9QXA7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim44Q9QXA7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim44Q9QXA7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim44Q9QXA7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.8■□□□□ 0.92
Trim44Q9QXA7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Trim44Q9QXA7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.8■□□□□ 0.92
Trim44Q9QXA7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.8■□□□□ 0.92
Trim44Q9QXA7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim44Q9QXA7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim44Q9QXA7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim44Q9QXA7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Trim44Q9QXA7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Trim44Q9QXA7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.8■□□□□ 0.92
Trim44Q9QXA7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim44Q9QXA7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim44Q9QXA7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim44Q9QXA7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trim44Q9QXA7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trim44Q9QXA7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim44Q9QXA7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim44Q9QXA7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.79■□□□□ 0.92
Trim44Q9QXA7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim44Q9QXA7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim44Q9QXA7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim44Q9QXA7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim44Q9QXA7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim44Q9QXA7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim44Q9QXA7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim44Q9QXA7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim44Q9QXA7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim44Q9QXA7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Trim44Q9QXA7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim44Q9QXA7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim44Q9QXA7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim44Q9QXA7 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim44Q9QXA7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim44Q9QXA7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.78■□□□□ 0.92
Trim44Q9QXA7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim44Q9QXA7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim44Q9QXA7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim44Q9QXA7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.78■□□□□ 0.92
Trim44Q9QXA7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim44Q9QXA7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim44Q9QXA7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Trim44Q9QXA7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim44Q9QXA7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim44Q9QXA7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim44Q9QXA7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim44Q9QXA7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim44Q9QXA7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Trim44Q9QXA7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim44Q9QXA7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Trim44Q9QXA7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim44Q9QXA7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim44Q9QXA7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim44Q9QXA7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim44Q9QXA7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim44Q9QXA7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim44Q9QXA7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim44Q9QXA7 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.77■□□□□ 0.92
Trim44Q9QXA7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim44Q9QXA7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim44Q9QXA7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim44Q9QXA7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim44Q9QXA7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim44Q9QXA7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trim44Q9QXA7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim44Q9QXA7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim44Q9QXA7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Trim44Q9QXA7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim44Q9QXA7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim44Q9QXA7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim44Q9QXA7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim44Q9QXA7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim44Q9QXA7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim44Q9QXA7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim44Q9QXA7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Trim44Q9QXA7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim44Q9QXA7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim44Q9QXA7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim44Q9QXA7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC20.76■□□□□ 0.91
Trim44Q9QXA7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim44Q9QXA7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim44Q9QXA7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim44Q9QXA7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim44Q9QXA7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim44Q9QXA7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim44Q9QXA7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Trim44Q9QXA7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Trim44Q9QXA7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.75■□□□□ 0.91
Trim44Q9QXA7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms