Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-4Q9EQM3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-4Q9EQM3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.44■□□□□ 0.54
Nkx2-4Q9EQM3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-4Q9EQM3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-4Q9EQM3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-4Q9EQM3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-4Q9EQM3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-4Q9EQM3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-4Q9EQM3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.44■□□□□ 0.54
Nkx2-4Q9EQM3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.44■□□□□ 0.54
Nkx2-4Q9EQM3 Gm7370-201ENSMUST00000219471 767 ntBASIC18.44■□□□□ 0.54
Nkx2-4Q9EQM3 Mzt1-203ENSMUST00000227948 952 ntBASIC18.44■□□□□ 0.54
Nkx2-4Q9EQM3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-4Q9EQM3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-4Q9EQM3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-4Q9EQM3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-4Q9EQM3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-4Q9EQM3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Nkx2-4Q9EQM3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-4Q9EQM3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-4Q9EQM3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-4Q9EQM3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-4Q9EQM3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-4Q9EQM3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.43■□□□□ 0.54
Nkx2-4Q9EQM3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.43■□□□□ 0.54
Nkx2-4Q9EQM3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-4Q9EQM3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Nkx2-4Q9EQM3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-4Q9EQM3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-4Q9EQM3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-4Q9EQM3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Gm7638-201ENSMUST00000121348 967 ntBASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Nkx2-4Q9EQM3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-4Q9EQM3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Nkx2-4Q9EQM3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-4Q9EQM3 Gm18958-201ENSMUST00000174258 762 ntBASIC18.41■□□□□ 0.54
Nkx2-4Q9EQM3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-4Q9EQM3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Nkx2-4Q9EQM3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-4Q9EQM3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Nkx2-4Q9EQM3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Nkx2-4Q9EQM3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-4Q9EQM3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Nkx2-4Q9EQM3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Nkx2-4Q9EQM3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-4Q9EQM3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-4Q9EQM3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.4■□□□□ 0.54
Nkx2-4Q9EQM3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Nkx2-4Q9EQM3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.4■□□□□ 0.54
Nkx2-4Q9EQM3 Mir1668-201ENSMUST00000184114 107 ntBASIC18.4■□□□□ 0.54
Nkx2-4Q9EQM3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.4■□□□□ 0.54
Nkx2-4Q9EQM3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-4Q9EQM3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Nkx2-4Q9EQM3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-4Q9EQM3 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.4■□□□□ 0.54
Nkx2-4Q9EQM3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-4Q9EQM3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-4Q9EQM3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-4Q9EQM3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.39■□□□□ 0.53
Nkx2-4Q9EQM3 Gm24589-201ENSMUST00000116692 94 ntBASIC18.39■□□□□ 0.53
Nkx2-4Q9EQM3 Mir3081-201ENSMUST00000175305 84 ntBASIC18.39■□□□□ 0.53
Nkx2-4Q9EQM3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.39■□□□□ 0.53
Nkx2-4Q9EQM3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nkx2-4Q9EQM3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-4Q9EQM3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-4Q9EQM3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-4Q9EQM3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.39■□□□□ 0.53
Nkx2-4Q9EQM3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-4Q9EQM3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-4Q9EQM3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.38■□□□□ 0.53
Nkx2-4Q9EQM3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-4Q9EQM3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-4Q9EQM3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms