Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Rsph9Q9D9V4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rsph9Q9D9V4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.58■□□□□ 0.4
Rsph9Q9D9V4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.58■□□□□ 0.4
Rsph9Q9D9V4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rsph9Q9D9V4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rsph9Q9D9V4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rsph9Q9D9V4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rsph9Q9D9V4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rsph9Q9D9V4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rsph9Q9D9V4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Rsph9Q9D9V4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rsph9Q9D9V4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.57■□□□□ 0.4
Rsph9Q9D9V4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rsph9Q9D9V4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rsph9Q9D9V4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rsph9Q9D9V4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.57■□□□□ 0.4
Rsph9Q9D9V4 Mir7071-201ENSMUST00000184847 69 ntBASIC17.57■□□□□ 0.4
Rsph9Q9D9V4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rsph9Q9D9V4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rsph9Q9D9V4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.57■□□□□ 0.4
Rsph9Q9D9V4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rsph9Q9D9V4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
Rsph9Q9D9V4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.57■□□□□ 0.4
Rsph9Q9D9V4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rsph9Q9D9V4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.57■□□□□ 0.4
Rsph9Q9D9V4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rsph9Q9D9V4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 Gm15375-201ENSMUST00000119510 849 ntBASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rsph9Q9D9V4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rsph9Q9D9V4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rsph9Q9D9V4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rsph9Q9D9V4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rsph9Q9D9V4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rsph9Q9D9V4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.55■□□□□ 0.4
Rsph9Q9D9V4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rsph9Q9D9V4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rsph9Q9D9V4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Rsph9Q9D9V4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.55■□□□□ 0.4
Rsph9Q9D9V4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rsph9Q9D9V4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rsph9Q9D9V4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rsph9Q9D9V4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rsph9Q9D9V4 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.55■□□□□ 0.4
Rsph9Q9D9V4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rsph9Q9D9V4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.55■□□□□ 0.4
Rsph9Q9D9V4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rsph9Q9D9V4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rsph9Q9D9V4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rsph9Q9D9V4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rsph9Q9D9V4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rsph9Q9D9V4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.54■□□□□ 0.4
Rsph9Q9D9V4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rsph9Q9D9V4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.54■□□□□ 0.4
Rsph9Q9D9V4 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.54■□□□□ 0.4
Rsph9Q9D9V4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rsph9Q9D9V4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rsph9Q9D9V4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rsph9Q9D9V4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rsph9Q9D9V4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rsph9Q9D9V4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rsph9Q9D9V4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rsph9Q9D9V4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rsph9Q9D9V4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.53■□□□□ 0.4
Rsph9Q9D9V4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rsph9Q9D9V4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rsph9Q9D9V4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rsph9Q9D9V4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rsph9Q9D9V4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rsph9Q9D9V4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rsph9Q9D9V4 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.53■□□□□ 0.4
Rsph9Q9D9V4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rsph9Q9D9V4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rsph9Q9D9V4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rsph9Q9D9V4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rsph9Q9D9V4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rsph9Q9D9V4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rsph9Q9D9V4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rsph9Q9D9V4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Rsph9Q9D9V4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rsph9Q9D9V4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms