Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Chaf1bQ9D0N7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chaf1bQ9D0N7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Chaf1bQ9D0N7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chaf1bQ9D0N7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chaf1bQ9D0N7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chaf1bQ9D0N7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chaf1bQ9D0N7 Gm8493-201ENSMUST00000196881 489 ntBASIC16.89■□□□□ 0.29
Chaf1bQ9D0N7 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.89■□□□□ 0.29
Chaf1bQ9D0N7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chaf1bQ9D0N7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chaf1bQ9D0N7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chaf1bQ9D0N7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Chaf1bQ9D0N7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.89■□□□□ 0.29
Chaf1bQ9D0N7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chaf1bQ9D0N7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chaf1bQ9D0N7 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.87■□□□□ 0.29
Chaf1bQ9D0N7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chaf1bQ9D0N7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chaf1bQ9D0N7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.87■□□□□ 0.29
Chaf1bQ9D0N7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chaf1bQ9D0N7 Gm43173-201ENSMUST00000202246 593 ntBASIC16.87■□□□□ 0.29
Chaf1bQ9D0N7 Gm40848-201ENSMUST00000221998 324 ntBASIC16.87■□□□□ 0.29
Chaf1bQ9D0N7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chaf1bQ9D0N7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Chaf1bQ9D0N7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chaf1bQ9D0N7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chaf1bQ9D0N7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Chaf1bQ9D0N7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chaf1bQ9D0N7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Chaf1bQ9D0N7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Chaf1bQ9D0N7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chaf1bQ9D0N7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chaf1bQ9D0N7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chaf1bQ9D0N7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chaf1bQ9D0N7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Chaf1bQ9D0N7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1bQ9D0N7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1bQ9D0N7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1bQ9D0N7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1bQ9D0N7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1bQ9D0N7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1bQ9D0N7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.86■□□□□ 0.29
Chaf1bQ9D0N7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Chaf1bQ9D0N7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1bQ9D0N7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Chaf1bQ9D0N7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1bQ9D0N7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1bQ9D0N7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1bQ9D0N7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Chaf1bQ9D0N7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1bQ9D0N7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1bQ9D0N7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1bQ9D0N7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1bQ9D0N7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Chaf1bQ9D0N7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.85■□□□□ 0.29
Chaf1bQ9D0N7 Gm21956-201ENSMUST00000179946 522 ntBASIC16.85■□□□□ 0.29
Chaf1bQ9D0N7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1bQ9D0N7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1bQ9D0N7 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.85■□□□□ 0.29
Chaf1bQ9D0N7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1bQ9D0N7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1bQ9D0N7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1bQ9D0N7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1bQ9D0N7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1bQ9D0N7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Chaf1bQ9D0N7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1bQ9D0N7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Chaf1bQ9D0N7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.84■□□□□ 0.29
Chaf1bQ9D0N7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1bQ9D0N7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1bQ9D0N7 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.84■□□□□ 0.29
Chaf1bQ9D0N7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms