Protein–RNA interactions for Protein: Q9D0C1

Rnf115, E3 ubiquitin-protein ligase RNF115, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf115Q9D0C1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf115Q9D0C1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf115Q9D0C1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Rnf115Q9D0C1 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.36■□□□□ 0.05
Rnf115Q9D0C1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf115Q9D0C1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf115Q9D0C1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf115Q9D0C1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf115Q9D0C1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf115Q9D0C1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf115Q9D0C1 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.35■□□□□ 0.05
Rnf115Q9D0C1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf115Q9D0C1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf115Q9D0C1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf115Q9D0C1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf115Q9D0C1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf115Q9D0C1 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.35■□□□□ 0.05
Rnf115Q9D0C1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.35■□□□□ 0.05
Rnf115Q9D0C1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.35■□□□□ 0.05
Rnf115Q9D0C1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf115Q9D0C1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.35■□□□□ 0.05
Rnf115Q9D0C1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rnf115Q9D0C1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf115Q9D0C1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf115Q9D0C1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf115Q9D0C1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rnf115Q9D0C1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf115Q9D0C1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 Gm10231-201ENSMUST00000181584 441 ntBASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 Gm10175-202ENSMUST00000208752 441 ntBASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf115Q9D0C1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Rnf115Q9D0C1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf115Q9D0C1 Grk6-206ENSMUST00000224995 2971 ntBASIC15.33■□□□□ 0.05
Rnf115Q9D0C1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf115Q9D0C1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf115Q9D0C1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.33■□□□□ 0.05
Rnf115Q9D0C1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf115Q9D0C1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf115Q9D0C1 Rarb-207ENSMUST00000225921 2756 ntBASIC15.33■□□□□ 0.04
Rnf115Q9D0C1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.33■□□□□ 0.04
Rnf115Q9D0C1 Gm43799-201ENSMUST00000201845 579 ntBASIC15.33■□□□□ 0.04
Rnf115Q9D0C1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf115Q9D0C1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf115Q9D0C1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rnf115Q9D0C1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf115Q9D0C1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf115Q9D0C1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf115Q9D0C1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf115Q9D0C1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf115Q9D0C1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf115Q9D0C1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf115Q9D0C1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rnf115Q9D0C1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf115Q9D0C1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.32■□□□□ 0.04
Rnf115Q9D0C1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf115Q9D0C1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf115Q9D0C1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf115Q9D0C1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf115Q9D0C1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf115Q9D0C1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Rnf115Q9D0C1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rnf115Q9D0C1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf115Q9D0C1 Gm21814-202ENSMUST00000203277 873 ntBASIC15.32■□□□□ 0.04
Rnf115Q9D0C1 Gm5417-201ENSMUST00000079706 384 ntBASIC15.32■□□□□ 0.04
Rnf115Q9D0C1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf115Q9D0C1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf115Q9D0C1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf115Q9D0C1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf115Q9D0C1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf115Q9D0C1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf115Q9D0C1 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.32■□□□□ 0.04
Rnf115Q9D0C1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf115Q9D0C1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf115Q9D0C1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rnf115Q9D0C1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf115Q9D0C1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf115Q9D0C1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf115Q9D0C1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf115Q9D0C1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.31■□□□□ 0.04
Rnf115Q9D0C1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rnf115Q9D0C1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf115Q9D0C1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms