Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC11.75□□□□□ -0.53
Rpl39lQ9CQD0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39lQ9CQD0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39lQ9CQD0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39lQ9CQD0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39lQ9CQD0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39lQ9CQD0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39lQ9CQD0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39lQ9CQD0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39lQ9CQD0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Gm13238-201ENSMUST00000117655 780 ntBASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Gm43566-201ENSMUST00000196851 808 ntBASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39lQ9CQD0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39lQ9CQD0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl39lQ9CQD0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Rpl39lQ9CQD0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl39lQ9CQD0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms