Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.69□□□□□ -0.06
H2afb1Q9CQ70 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1Q9CQ70 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1Q9CQ70 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1Q9CQ70 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1Q9CQ70 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.69□□□□□ -0.06
H2afb1Q9CQ70 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1Q9CQ70 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.69□□□□□ -0.06
H2afb1Q9CQ70 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.69□□□□□ -0.06
H2afb1Q9CQ70 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
H2afb1Q9CQ70 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1Q9CQ70 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1Q9CQ70 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1Q9CQ70 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1Q9CQ70 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1Q9CQ70 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
H2afb1Q9CQ70 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.68□□□□□ -0.06
H2afb1Q9CQ70 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.68□□□□□ -0.06
H2afb1Q9CQ70 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1Q9CQ70 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1Q9CQ70 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1Q9CQ70 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1Q9CQ70 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1Q9CQ70 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1Q9CQ70 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1Q9CQ70 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
H2afb1Q9CQ70 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1Q9CQ70 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1Q9CQ70 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1Q9CQ70 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1Q9CQ70 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1Q9CQ70 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1Q9CQ70 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
H2afb1Q9CQ70 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1Q9CQ70 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1Q9CQ70 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1Q9CQ70 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1Q9CQ70 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.66□□□□□ -0.06
H2afb1Q9CQ70 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1Q9CQ70 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1Q9CQ70 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1Q9CQ70 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
H2afb1Q9CQ70 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1Q9CQ70 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1Q9CQ70 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.65□□□□□ -0.06
H2afb1Q9CQ70 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1Q9CQ70 Gm18284-201ENSMUST00000172604 624 ntBASIC14.65□□□□□ -0.06
H2afb1Q9CQ70 Gm6365-201ENSMUST00000054711 744 ntBASIC14.65□□□□□ -0.06
H2afb1Q9CQ70 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1Q9CQ70 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1Q9CQ70 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1Q9CQ70 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1Q9CQ70 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1Q9CQ70 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
H2afb1Q9CQ70 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1Q9CQ70 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1Q9CQ70 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Gm7290-201ENSMUST00000104990 617 ntBASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Gm12918-201ENSMUST00000120234 636 ntBASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Gm15710-201ENSMUST00000121821 636 ntBASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Gm5075-201ENSMUST00000196916 622 ntBASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
H2afb1Q9CQ70 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms