Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx6-1Q99MA9 Gm17971-201ENSMUST00000190239 806 ntBASIC16.8■□□□□ 0.28
Nkx6-1Q99MA9 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.8■□□□□ 0.28
Nkx6-1Q99MA9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx6-1Q99MA9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx6-1Q99MA9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx6-1Q99MA9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx6-1Q99MA9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx6-1Q99MA9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx6-1Q99MA9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx6-1Q99MA9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx6-1Q99MA9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx6-1Q99MA9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx6-1Q99MA9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx6-1Q99MA9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx6-1Q99MA9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Nkx6-1Q99MA9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nkx6-1Q99MA9 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.79■□□□□ 0.28
Nkx6-1Q99MA9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Nkx6-1Q99MA9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.79■□□□□ 0.28
Nkx6-1Q99MA9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx6-1Q99MA9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx6-1Q99MA9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nkx6-1Q99MA9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx6-1Q99MA9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx6-1Q99MA9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Nkx6-1Q99MA9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx6-1Q99MA9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx6-1Q99MA9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Nkx6-1Q99MA9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx6-1Q99MA9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx6-1Q99MA9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.78■□□□□ 0.28
Nkx6-1Q99MA9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.78■□□□□ 0.28
Nkx6-1Q99MA9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx6-1Q99MA9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx6-1Q99MA9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx6-1Q99MA9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx6-1Q99MA9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx6-1Q99MA9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx6-1Q99MA9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx6-1Q99MA9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx6-1Q99MA9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Nkx6-1Q99MA9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx6-1Q99MA9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx6-1Q99MA9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx6-1Q99MA9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx6-1Q99MA9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.77■□□□□ 0.28
Nkx6-1Q99MA9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx6-1Q99MA9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx6-1Q99MA9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx6-1Q99MA9 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.77■□□□□ 0.27
Nkx6-1Q99MA9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx6-1Q99MA9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx6-1Q99MA9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx6-1Q99MA9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.77■□□□□ 0.27
Nkx6-1Q99MA9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.77■□□□□ 0.27
Nkx6-1Q99MA9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx6-1Q99MA9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx6-1Q99MA9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx6-1Q99MA9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx6-1Q99MA9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx6-1Q99MA9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.76■□□□□ 0.27
Nkx6-1Q99MA9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.76■□□□□ 0.27
Nkx6-1Q99MA9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx6-1Q99MA9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx6-1Q99MA9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx6-1Q99MA9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx6-1Q99MA9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx6-1Q99MA9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Nkx6-1Q99MA9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx6-1Q99MA9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx6-1Q99MA9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx6-1Q99MA9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.75■□□□□ 0.27
Nkx6-1Q99MA9 Mir2861-201ENSMUST00000175539 82 ntBASIC16.75■□□□□ 0.27
Nkx6-1Q99MA9 Gm27704-201ENSMUST00000185094 107 ntBASIC16.75■□□□□ 0.27
Nkx6-1Q99MA9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.75■□□□□ 0.27
Nkx6-1Q99MA9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx6-1Q99MA9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx6-1Q99MA9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx6-1Q99MA9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx6-1Q99MA9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx6-1Q99MA9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms