Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.24■□□□□ 0.35
Pcdhb20Q91XZ9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.24■□□□□ 0.35
Pcdhb20Q91XZ9 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb20Q91XZ9 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.24■□□□□ 0.35
Pcdhb20Q91XZ9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb20Q91XZ9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb20Q91XZ9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb20Q91XZ9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb20Q91XZ9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb20Q91XZ9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb20Q91XZ9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb20Q91XZ9 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.23■□□□□ 0.35
Pcdhb20Q91XZ9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb20Q91XZ9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb20Q91XZ9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb20Q91XZ9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb20Q91XZ9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb20Q91XZ9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb20Q91XZ9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb20Q91XZ9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdhb20Q91XZ9 Gm15375-201ENSMUST00000119510 849 ntBASIC17.23■□□□□ 0.35
Pcdhb20Q91XZ9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb20Q91XZ9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdhb20Q91XZ9 Gm10698-201ENSMUST00000182663 604 ntBASIC17.23■□□□□ 0.35
Pcdhb20Q91XZ9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb20Q91XZ9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb20Q91XZ9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb20Q91XZ9 Gm9519-201ENSMUST00000206108 1337 ntBASIC17.22■□□□□ 0.35
Pcdhb20Q91XZ9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb20Q91XZ9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.22■□□□□ 0.35
Pcdhb20Q91XZ9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb20Q91XZ9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb20Q91XZ9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.22■□□□□ 0.35
Pcdhb20Q91XZ9 Mir6349-201ENSMUST00000184059 97 ntBASIC17.22■□□□□ 0.35
Pcdhb20Q91XZ9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.22■□□□□ 0.35
Pcdhb20Q91XZ9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb20Q91XZ9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb20Q91XZ9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhb20Q91XZ9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb20Q91XZ9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb20Q91XZ9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb20Q91XZ9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb20Q91XZ9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb20Q91XZ9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb20Q91XZ9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb20Q91XZ9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb20Q91XZ9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdhb20Q91XZ9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb20Q91XZ9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb20Q91XZ9 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdhb20Q91XZ9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb20Q91XZ9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb20Q91XZ9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb20Q91XZ9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb20Q91XZ9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb20Q91XZ9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhb20Q91XZ9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.34
Pcdhb20Q91XZ9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb20Q91XZ9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb20Q91XZ9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb20Q91XZ9 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb20Q91XZ9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb20Q91XZ9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb20Q91XZ9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhb20Q91XZ9 Gm19324-201ENSMUST00000213229 1169 ntBASIC17.2■□□□□ 0.34
Pcdhb20Q91XZ9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.2■□□□□ 0.34
Pcdhb20Q91XZ9 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.2■□□□□ 0.34
Pcdhb20Q91XZ9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb20Q91XZ9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb20Q91XZ9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
Pcdhb20Q91XZ9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb20Q91XZ9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb20Q91XZ9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb20Q91XZ9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb20Q91XZ9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb20Q91XZ9 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.19■□□□□ 0.34
Pcdhb20Q91XZ9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb20Q91XZ9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb20Q91XZ9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhb20Q91XZ9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb20Q91XZ9 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC17.19■□□□□ 0.34
Pcdhb20Q91XZ9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdhb20Q91XZ9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb20Q91XZ9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb20Q91XZ9 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.19■□□□□ 0.34
Pcdhb20Q91XZ9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb20Q91XZ9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb20Q91XZ9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.19■□□□□ 0.34
Pcdhb20Q91XZ9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb20Q91XZ9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb20Q91XZ9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms