Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb5Q91XX5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb5Q91XX5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb5Q91XX5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb5Q91XX5 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb5Q91XX5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb5Q91XX5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb5Q91XX5 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb5Q91XX5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhgb5Q91XX5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhgb5Q91XX5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhgb5Q91XX5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
Pcdhgb5Q91XX5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb5Q91XX5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb5Q91XX5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb5Q91XX5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
Pcdhgb5Q91XX5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb5Q91XX5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb5Q91XX5 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb5Q91XX5 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb5Q91XX5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb5Q91XX5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb5Q91XX5 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb5Q91XX5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhgb5Q91XX5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdhgb5Q91XX5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb5Q91XX5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb5Q91XX5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb5Q91XX5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb5Q91XX5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb5Q91XX5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb5Q91XX5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdhgb5Q91XX5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb5Q91XX5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Pcdhgb5Q91XX5 Gm10231-201ENSMUST00000181584 441 ntBASIC17.79■□□□□ 0.44
Pcdhgb5Q91XX5 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb5Q91XX5 Gm10175-202ENSMUST00000208752 441 ntBASIC17.79■□□□□ 0.44
Pcdhgb5Q91XX5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pcdhgb5Q91XX5 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb5Q91XX5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb5Q91XX5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb5Q91XX5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb5Q91XX5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb5Q91XX5 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.79■□□□□ 0.44
Pcdhgb5Q91XX5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb5Q91XX5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb5Q91XX5 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb5Q91XX5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb5Q91XX5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhgb5Q91XX5 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb5Q91XX5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb5Q91XX5 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.78■□□□□ 0.44
Pcdhgb5Q91XX5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb5Q91XX5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb5Q91XX5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb5Q91XX5 Gm3375-201ENSMUST00000203929 796 ntBASIC17.78■□□□□ 0.44
Pcdhgb5Q91XX5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb5Q91XX5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb5Q91XX5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb5Q91XX5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb5Q91XX5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb5Q91XX5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.77■□□□□ 0.44
Pcdhgb5Q91XX5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.77■□□□□ 0.44
Pcdhgb5Q91XX5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb5Q91XX5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.77■□□□□ 0.44
Pcdhgb5Q91XX5 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.77■□□□□ 0.44
Pcdhgb5Q91XX5 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.77■□□□□ 0.44
Pcdhgb5Q91XX5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb5Q91XX5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb5Q91XX5 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb5Q91XX5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb5Q91XX5 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.77■□□□□ 0.44
Pcdhgb5Q91XX5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgb5Q91XX5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgb5Q91XX5 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgb5Q91XX5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgb5Q91XX5 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb5Q91XX5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb5Q91XX5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb5Q91XX5 Iqck-206ENSMUST00000208658 2891 ntBASIC17.76■□□□□ 0.43
Pcdhgb5Q91XX5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb5Q91XX5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb5Q91XX5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb5Q91XX5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb5Q91XX5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb5Q91XX5 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb5Q91XX5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb5Q91XX5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb5Q91XX5 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.76■□□□□ 0.43
Pcdhgb5Q91XX5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb5Q91XX5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb5Q91XX5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb5Q91XX5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb5Q91XX5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb5Q91XX5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb5Q91XX5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb5Q91XX5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb5Q91XX5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.75■□□□□ 0.43
Pcdhgb5Q91XX5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb5Q91XX5 Mir2861-201ENSMUST00000175539 82 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms