Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rab40cQ8VHQ4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rab40cQ8VHQ4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rab40cQ8VHQ4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rab40cQ8VHQ4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rab40cQ8VHQ4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.67□□□□□ -0.06
Rab40cQ8VHQ4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rab40cQ8VHQ4 Smad6-203ENSMUST00000179458 273 ntBASIC14.67□□□□□ -0.06
Rab40cQ8VHQ4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.67□□□□□ -0.06
Rab40cQ8VHQ4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.67□□□□□ -0.06
Rab40cQ8VHQ4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.67□□□□□ -0.06
Rab40cQ8VHQ4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rab40cQ8VHQ4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rab40cQ8VHQ4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rab40cQ8VHQ4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rab40cQ8VHQ4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.67□□□□□ -0.06
Rab40cQ8VHQ4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rab40cQ8VHQ4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rab40cQ8VHQ4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rab40cQ8VHQ4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rab40cQ8VHQ4 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rab40cQ8VHQ4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 Gm12251-201ENSMUST00000117893 792 ntBASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rab40cQ8VHQ4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Rab40cQ8VHQ4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40cQ8VHQ4 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms