Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40bQ8VHP8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40bQ8VHP8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40bQ8VHP8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40bQ8VHP8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Rab40bQ8VHP8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.18■□□□□ 0.18
Rab40bQ8VHP8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40bQ8VHP8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Rab40bQ8VHP8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40bQ8VHP8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40bQ8VHP8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rab40bQ8VHP8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40bQ8VHP8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40bQ8VHP8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Rab40bQ8VHP8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.17■□□□□ 0.18
Rab40bQ8VHP8 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.16■□□□□ 0.18
Rab40bQ8VHP8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rab40bQ8VHP8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab40bQ8VHP8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rab40bQ8VHP8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab40bQ8VHP8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rab40bQ8VHP8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rab40bQ8VHP8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rab40bQ8VHP8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.16■□□□□ 0.18
Rab40bQ8VHP8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rab40bQ8VHP8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.16■□□□□ 0.18
Rab40bQ8VHP8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rab40bQ8VHP8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab40bQ8VHP8 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.16■□□□□ 0.18
Rab40bQ8VHP8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rab40bQ8VHP8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab40bQ8VHP8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab40bQ8VHP8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab40bQ8VHP8 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.15■□□□□ 0.18
Rab40bQ8VHP8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab40bQ8VHP8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rab40bQ8VHP8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab40bQ8VHP8 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.15■□□□□ 0.18
Rab40bQ8VHP8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab40bQ8VHP8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab40bQ8VHP8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab40bQ8VHP8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab40bQ8VHP8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab40bQ8VHP8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab40bQ8VHP8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Rab40bQ8VHP8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab40bQ8VHP8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab40bQ8VHP8 Gm26833-201ENSMUST00000180899 440 ntBASIC16.14■□□□□ 0.17
Rab40bQ8VHP8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.14■□□□□ 0.17
Rab40bQ8VHP8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab40bQ8VHP8 Gm13241-201ENSMUST00000094493 780 ntBASIC16.14■□□□□ 0.17
Rab40bQ8VHP8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rab40bQ8VHP8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab40bQ8VHP8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab40bQ8VHP8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab40bQ8VHP8 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.14■□□□□ 0.17
Rab40bQ8VHP8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab40bQ8VHP8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab40bQ8VHP8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40bQ8VHP8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40bQ8VHP8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40bQ8VHP8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40bQ8VHP8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40bQ8VHP8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40bQ8VHP8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Rab40bQ8VHP8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40bQ8VHP8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.13■□□□□ 0.17
Rab40bQ8VHP8 Gm40848-201ENSMUST00000221998 324 ntBASIC16.13■□□□□ 0.17
Rab40bQ8VHP8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40bQ8VHP8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40bQ8VHP8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rab40bQ8VHP8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.13■□□□□ 0.17
Rab40bQ8VHP8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40bQ8VHP8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40bQ8VHP8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40bQ8VHP8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40bQ8VHP8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rab40bQ8VHP8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms