Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ddx39aQ8VDW0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ddx39aQ8VDW0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ddx39aQ8VDW0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ddx39aQ8VDW0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx39aQ8VDW0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx39aQ8VDW0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx39aQ8VDW0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx39aQ8VDW0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx39aQ8VDW0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx39aQ8VDW0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ddx39aQ8VDW0 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.94■□□□□ 0.78
Ddx39aQ8VDW0 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.94■□□□□ 0.78
Ddx39aQ8VDW0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx39aQ8VDW0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx39aQ8VDW0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ddx39aQ8VDW0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ddx39aQ8VDW0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx39aQ8VDW0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx39aQ8VDW0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx39aQ8VDW0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx39aQ8VDW0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx39aQ8VDW0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ddx39aQ8VDW0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx39aQ8VDW0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.93■□□□□ 0.78
Ddx39aQ8VDW0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx39aQ8VDW0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx39aQ8VDW0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.93■□□□□ 0.78
Ddx39aQ8VDW0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx39aQ8VDW0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Ddx39aQ8VDW0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx39aQ8VDW0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.93■□□□□ 0.78
Ddx39aQ8VDW0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx39aQ8VDW0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx39aQ8VDW0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx39aQ8VDW0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx39aQ8VDW0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Ddx39aQ8VDW0 Mir2861-201ENSMUST00000175539 82 ntBASIC19.92■□□□□ 0.78
Ddx39aQ8VDW0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx39aQ8VDW0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx39aQ8VDW0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx39aQ8VDW0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx39aQ8VDW0 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.92■□□□□ 0.78
Ddx39aQ8VDW0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.91■□□□□ 0.78
Ddx39aQ8VDW0 Golph3-205ENSMUST00000228671 2842 ntBASIC19.91■□□□□ 0.78
Ddx39aQ8VDW0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx39aQ8VDW0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx39aQ8VDW0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx39aQ8VDW0 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.91■□□□□ 0.78
Ddx39aQ8VDW0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx39aQ8VDW0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.91■□□□□ 0.78
Ddx39aQ8VDW0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx39aQ8VDW0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx39aQ8VDW0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx39aQ8VDW0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx39aQ8VDW0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx39aQ8VDW0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx39aQ8VDW0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx39aQ8VDW0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ddx39aQ8VDW0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx39aQ8VDW0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ddx39aQ8VDW0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx39aQ8VDW0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx39aQ8VDW0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx39aQ8VDW0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx39aQ8VDW0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx39aQ8VDW0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.9■□□□□ 0.78
Ddx39aQ8VDW0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.9■□□□□ 0.78
Ddx39aQ8VDW0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx39aQ8VDW0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx39aQ8VDW0 Gm9987-201ENSMUST00000069768 567 ntBASIC19.9■□□□□ 0.78
Ddx39aQ8VDW0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx39aQ8VDW0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx39aQ8VDW0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx39aQ8VDW0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx39aQ8VDW0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx39aQ8VDW0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx39aQ8VDW0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ddx39aQ8VDW0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ddx39aQ8VDW0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ddx39aQ8VDW0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Ddx39aQ8VDW0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx39aQ8VDW0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Ddx39aQ8VDW0 Gm7977-201ENSMUST00000193787 748 ntBASIC19.89■□□□□ 0.77
Ddx39aQ8VDW0 Gm43799-201ENSMUST00000201845 579 ntBASIC19.89■□□□□ 0.77
Ddx39aQ8VDW0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.89■□□□□ 0.77
Ddx39aQ8VDW0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ddx39aQ8VDW0 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.89■□□□□ 0.77
Ddx39aQ8VDW0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx39aQ8VDW0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx39aQ8VDW0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ddx39aQ8VDW0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.89■□□□□ 0.77
Ddx39aQ8VDW0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx39aQ8VDW0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx39aQ8VDW0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx39aQ8VDW0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx39aQ8VDW0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ddx39aQ8VDW0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx39aQ8VDW0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ddx39aQ8VDW0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms