Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cuedc1Q8R3V6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cuedc1Q8R3V6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cuedc1Q8R3V6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cuedc1Q8R3V6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cuedc1Q8R3V6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cuedc1Q8R3V6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.25■□□□□ 0.19
Cuedc1Q8R3V6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cuedc1Q8R3V6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cuedc1Q8R3V6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cuedc1Q8R3V6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cuedc1Q8R3V6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cuedc1Q8R3V6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.25■□□□□ 0.19
Cuedc1Q8R3V6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cuedc1Q8R3V6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cuedc1Q8R3V6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cuedc1Q8R3V6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cuedc1Q8R3V6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cuedc1Q8R3V6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cuedc1Q8R3V6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cuedc1Q8R3V6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cuedc1Q8R3V6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cuedc1Q8R3V6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cuedc1Q8R3V6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Mir5122-201ENSMUST00000175004 89 ntBASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Gm43799-201ENSMUST00000201845 579 ntBASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cuedc1Q8R3V6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Gm10231-201ENSMUST00000181584 441 ntBASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Gm10175-202ENSMUST00000208752 441 ntBASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Golph3-205ENSMUST00000228671 2842 ntBASIC16.23■□□□□ 0.19
Cuedc1Q8R3V6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cuedc1Q8R3V6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Cuedc1Q8R3V6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cuedc1Q8R3V6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cuedc1Q8R3V6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms