Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.44■□□□□ 0.38
Rdh1Q8CGV4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.44■□□□□ 0.38
Rdh1Q8CGV4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rdh1Q8CGV4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rdh1Q8CGV4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rdh1Q8CGV4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rdh1Q8CGV4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rdh1Q8CGV4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rdh1Q8CGV4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rdh1Q8CGV4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh1Q8CGV4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rdh1Q8CGV4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh1Q8CGV4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh1Q8CGV4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh1Q8CGV4 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.43■□□□□ 0.38
Rdh1Q8CGV4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rdh1Q8CGV4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh1Q8CGV4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh1Q8CGV4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh1Q8CGV4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh1Q8CGV4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh1Q8CGV4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh1Q8CGV4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh1Q8CGV4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh1Q8CGV4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh1Q8CGV4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh1Q8CGV4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh1Q8CGV4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Rdh1Q8CGV4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.42■□□□□ 0.38
Rdh1Q8CGV4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh1Q8CGV4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Rdh1Q8CGV4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.42■□□□□ 0.38
Rdh1Q8CGV4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh1Q8CGV4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh1Q8CGV4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rdh1Q8CGV4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Rdh1Q8CGV4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh1Q8CGV4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh1Q8CGV4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh1Q8CGV4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh1Q8CGV4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rdh1Q8CGV4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh1Q8CGV4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh1Q8CGV4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh1Q8CGV4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh1Q8CGV4 Gm15565-201ENSMUST00000118890 427 ntBASIC17.41■□□□□ 0.38
Rdh1Q8CGV4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh1Q8CGV4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh1Q8CGV4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh1Q8CGV4 Gm5417-201ENSMUST00000079706 384 ntBASIC17.41■□□□□ 0.38
Rdh1Q8CGV4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rdh1Q8CGV4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh1Q8CGV4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh1Q8CGV4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Rdh1Q8CGV4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh1Q8CGV4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Rdh1Q8CGV4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh1Q8CGV4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh1Q8CGV4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rdh1Q8CGV4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rdh1Q8CGV4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Rdh1Q8CGV4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rdh1Q8CGV4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rdh1Q8CGV4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rdh1Q8CGV4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.4■□□□□ 0.38
Rdh1Q8CGV4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rdh1Q8CGV4 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.4■□□□□ 0.38
Rdh1Q8CGV4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Rdh1Q8CGV4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.4■□□□□ 0.38
Rdh1Q8CGV4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rdh1Q8CGV4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rdh1Q8CGV4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rdh1Q8CGV4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rdh1Q8CGV4 Iqck-206ENSMUST00000208658 2891 ntBASIC17.4■□□□□ 0.38
Rdh1Q8CGV4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.4■□□□□ 0.38
Rdh1Q8CGV4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Rdh1Q8CGV4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rdh1Q8CGV4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Rdh1Q8CGV4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rdh1Q8CGV4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rdh1Q8CGV4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rdh1Q8CGV4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rdh1Q8CGV4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rdh1Q8CGV4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.39■□□□□ 0.37
Rdh1Q8CGV4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.39■□□□□ 0.37
Rdh1Q8CGV4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rdh1Q8CGV4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rdh1Q8CGV4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rdh1Q8CGV4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.39■□□□□ 0.37
Rdh1Q8CGV4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rdh1Q8CGV4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rdh1Q8CGV4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rdh1Q8CGV4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rdh1Q8CGV4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.38■□□□□ 0.37
Rdh1Q8CGV4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
Rdh1Q8CGV4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rdh1Q8CGV4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.38■□□□□ 0.37
Rdh1Q8CGV4 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.38■□□□□ 0.37
Rdh1Q8CGV4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rdh1Q8CGV4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms