Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rbm28Q8CGC6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rbm28Q8CGC6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rbm28Q8CGC6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Rbm28Q8CGC6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.22■□□□□ 0.99
Rbm28Q8CGC6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rbm28Q8CGC6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rbm28Q8CGC6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Rbm28Q8CGC6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rbm28Q8CGC6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rbm28Q8CGC6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Rbm28Q8CGC6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rbm28Q8CGC6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rbm28Q8CGC6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rbm28Q8CGC6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rbm28Q8CGC6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rbm28Q8CGC6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rbm28Q8CGC6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rbm28Q8CGC6 Mtag2-201ENSMUST00000058665 714 ntBASIC21.21■□□□□ 0.99
Rbm28Q8CGC6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rbm28Q8CGC6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rbm28Q8CGC6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rbm28Q8CGC6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
Rbm28Q8CGC6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.2■□□□□ 0.98
Rbm28Q8CGC6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.2■□□□□ 0.98
Rbm28Q8CGC6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rbm28Q8CGC6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
Rbm28Q8CGC6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rbm28Q8CGC6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rbm28Q8CGC6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rbm28Q8CGC6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rbm28Q8CGC6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.19■□□□□ 0.98
Rbm28Q8CGC6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rbm28Q8CGC6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rbm28Q8CGC6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rbm28Q8CGC6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rbm28Q8CGC6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.19■□□□□ 0.98
Rbm28Q8CGC6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rbm28Q8CGC6 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.19■□□□□ 0.98
Rbm28Q8CGC6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.19■□□□□ 0.98
Rbm28Q8CGC6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rbm28Q8CGC6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rbm28Q8CGC6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rbm28Q8CGC6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rbm28Q8CGC6 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rbm28Q8CGC6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Rbm28Q8CGC6 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.18■□□□□ 0.98
Rbm28Q8CGC6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rbm28Q8CGC6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Rbm28Q8CGC6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.18■□□□□ 0.98
Rbm28Q8CGC6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rbm28Q8CGC6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Rbm28Q8CGC6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rbm28Q8CGC6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rbm28Q8CGC6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rbm28Q8CGC6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rbm28Q8CGC6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rbm28Q8CGC6 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.17■□□□□ 0.98
Rbm28Q8CGC6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rbm28Q8CGC6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rbm28Q8CGC6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rbm28Q8CGC6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.17■□□□□ 0.98
Rbm28Q8CGC6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rbm28Q8CGC6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rbm28Q8CGC6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.17■□□□□ 0.98
Rbm28Q8CGC6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rbm28Q8CGC6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rbm28Q8CGC6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rbm28Q8CGC6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rbm28Q8CGC6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rbm28Q8CGC6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rbm28Q8CGC6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Rbm28Q8CGC6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.16■□□□□ 0.98
Rbm28Q8CGC6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rbm28Q8CGC6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.16■□□□□ 0.98
Rbm28Q8CGC6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.16■□□□□ 0.98
Rbm28Q8CGC6 Gm38285-201ENSMUST00000192928 922 ntBASIC21.16■□□□□ 0.98
Rbm28Q8CGC6 Gm10138-203ENSMUST00000206952 366 ntBASIC21.16■□□□□ 0.98
Rbm28Q8CGC6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.16■□□□□ 0.98
Rbm28Q8CGC6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rbm28Q8CGC6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rbm28Q8CGC6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rbm28Q8CGC6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rbm28Q8CGC6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Rbm28Q8CGC6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rbm28Q8CGC6 Gm37055-201ENSMUST00000191866 133 ntBASIC21.15■□□□□ 0.98
Rbm28Q8CGC6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.15■□□□□ 0.98
Rbm28Q8CGC6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Rbm28Q8CGC6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Rbm28Q8CGC6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rbm28Q8CGC6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rbm28Q8CGC6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Rbm28Q8CGC6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rbm28Q8CGC6 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.14■□□□□ 0.98
Rbm28Q8CGC6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rbm28Q8CGC6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rbm28Q8CGC6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Rbm28Q8CGC6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.14■□□□□ 0.97
Rbm28Q8CGC6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rbm28Q8CGC6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms