Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.02■□□□□ 0.15
ShfQ8CG80 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
ShfQ8CG80 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ShfQ8CG80 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ShfQ8CG80 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ShfQ8CG80 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
ShfQ8CG80 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShfQ8CG80 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.01■□□□□ 0.15
ShfQ8CG80 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
ShfQ8CG80 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.01■□□□□ 0.15
ShfQ8CG80 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.01■□□□□ 0.15
ShfQ8CG80 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.01■□□□□ 0.15
ShfQ8CG80 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
ShfQ8CG80 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShfQ8CG80 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ShfQ8CG80 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShfQ8CG80 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShfQ8CG80 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShfQ8CG80 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShfQ8CG80 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShfQ8CG80 Idnk-204ENSMUST00000226010 1898 ntBASIC16.01■□□□□ 0.15
ShfQ8CG80 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.01■□□□□ 0.15
ShfQ8CG80 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShfQ8CG80 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShfQ8CG80 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShfQ8CG80 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShfQ8CG80 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShfQ8CG80 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
ShfQ8CG80 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ShfQ8CG80 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16■□□□□ 0.15
ShfQ8CG80 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ShfQ8CG80 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ShfQ8CG80 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ShfQ8CG80 Gm37563-201ENSMUST00000192580 1513 ntBASIC16■□□□□ 0.15
ShfQ8CG80 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
ShfQ8CG80 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
ShfQ8CG80 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ShfQ8CG80 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
ShfQ8CG80 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ShfQ8CG80 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ShfQ8CG80 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
ShfQ8CG80 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
ShfQ8CG80 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16■□□□□ 0.15
ShfQ8CG80 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ShfQ8CG80 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ShfQ8CG80 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ShfQ8CG80 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ShfQ8CG80 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ShfQ8CG80 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.99■□□□□ 0.15
ShfQ8CG80 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ShfQ8CG80 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ShfQ8CG80 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.99■□□□□ 0.15
ShfQ8CG80 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ShfQ8CG80 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ShfQ8CG80 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ShfQ8CG80 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
ShfQ8CG80 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ShfQ8CG80 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
ShfQ8CG80 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ShfQ8CG80 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ShfQ8CG80 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.98■□□□□ 0.15
ShfQ8CG80 Gm7514-201ENSMUST00000209475 934 ntBASIC15.98■□□□□ 0.15
ShfQ8CG80 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
ShfQ8CG80 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.98■□□□□ 0.15
ShfQ8CG80 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ShfQ8CG80 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ShfQ8CG80 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ShfQ8CG80 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ShfQ8CG80 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ShfQ8CG80 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ShfQ8CG80 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ShfQ8CG80 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.97■□□□□ 0.15
ShfQ8CG80 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.97■□□□□ 0.15
ShfQ8CG80 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
ShfQ8CG80 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ShfQ8CG80 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.97■□□□□ 0.15
ShfQ8CG80 Gm10033-202ENSMUST00000211874 928 ntBASIC15.97■□□□□ 0.15
ShfQ8CG80 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ShfQ8CG80 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.97■□□□□ 0.15
ShfQ8CG80 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ShfQ8CG80 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ShfQ8CG80 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ShfQ8CG80 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ShfQ8CG80 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ShfQ8CG80 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ShfQ8CG80 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ShfQ8CG80 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ShfQ8CG80 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ShfQ8CG80 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ShfQ8CG80 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ShfQ8CG80 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ShfQ8CG80 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ShfQ8CG80 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ShfQ8CG80 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ShfQ8CG80 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.96■□□□□ 0.15
ShfQ8CG80 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.96■□□□□ 0.15
ShfQ8CG80 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
ShfQ8CG80 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ShfQ8CG80 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ShfQ8CG80 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms