Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smco1Q8CEZ1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smco1Q8CEZ1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Smco1Q8CEZ1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smco1Q8CEZ1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smco1Q8CEZ1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smco1Q8CEZ1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Smco1Q8CEZ1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smco1Q8CEZ1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.4■□□□□ 0.22
Smco1Q8CEZ1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.4■□□□□ 0.22
Smco1Q8CEZ1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Smco1Q8CEZ1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smco1Q8CEZ1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Smco1Q8CEZ1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smco1Q8CEZ1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smco1Q8CEZ1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smco1Q8CEZ1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smco1Q8CEZ1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Smco1Q8CEZ1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco1Q8CEZ1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smco1Q8CEZ1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco1Q8CEZ1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco1Q8CEZ1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco1Q8CEZ1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco1Q8CEZ1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco1Q8CEZ1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco1Q8CEZ1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smco1Q8CEZ1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco1Q8CEZ1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco1Q8CEZ1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco1Q8CEZ1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco1Q8CEZ1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco1Q8CEZ1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco1Q8CEZ1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smco1Q8CEZ1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco1Q8CEZ1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco1Q8CEZ1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco1Q8CEZ1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco1Q8CEZ1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco1Q8CEZ1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco1Q8CEZ1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco1Q8CEZ1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco1Q8CEZ1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smco1Q8CEZ1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco1Q8CEZ1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Smco1Q8CEZ1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco1Q8CEZ1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco1Q8CEZ1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco1Q8CEZ1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco1Q8CEZ1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco1Q8CEZ1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco1Q8CEZ1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco1Q8CEZ1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco1Q8CEZ1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco1Q8CEZ1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.37■□□□□ 0.21
Smco1Q8CEZ1 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.37■□□□□ 0.21
Smco1Q8CEZ1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Smco1Q8CEZ1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco1Q8CEZ1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco1Q8CEZ1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco1Q8CEZ1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco1Q8CEZ1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smco1Q8CEZ1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Smco1Q8CEZ1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.37■□□□□ 0.21
Smco1Q8CEZ1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco1Q8CEZ1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smco1Q8CEZ1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smco1Q8CEZ1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smco1Q8CEZ1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smco1Q8CEZ1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smco1Q8CEZ1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.36■□□□□ 0.21
Smco1Q8CEZ1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smco1Q8CEZ1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.36■□□□□ 0.21
Smco1Q8CEZ1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.36■□□□□ 0.21
Smco1Q8CEZ1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smco1Q8CEZ1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smco1Q8CEZ1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smco1Q8CEZ1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Smco1Q8CEZ1 Haglr-201ENSMUST00000100000 2085 ntBASIC16.36■□□□□ 0.21
Smco1Q8CEZ1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smco1Q8CEZ1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smco1Q8CEZ1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.36■□□□□ 0.21
Smco1Q8CEZ1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco1Q8CEZ1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco1Q8CEZ1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco1Q8CEZ1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco1Q8CEZ1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Smco1Q8CEZ1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco1Q8CEZ1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smco1Q8CEZ1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco1Q8CEZ1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco1Q8CEZ1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco1Q8CEZ1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco1Q8CEZ1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco1Q8CEZ1 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.35■□□□□ 0.21
Smco1Q8CEZ1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco1Q8CEZ1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco1Q8CEZ1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco1Q8CEZ1 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.35■□□□□ 0.21
Smco1Q8CEZ1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms