Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Tgds-204ENSMUST00000228543 1594 ntBASIC17.73■□□□□ 0.43
Ccdc28bQ8CEG5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc28bQ8CEG5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.73■□□□□ 0.43
Ccdc28bQ8CEG5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Mir7075-201ENSMUST00000184187 82 ntBASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.72■□□□□ 0.43
Ccdc28bQ8CEG5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28bQ8CEG5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28bQ8CEG5 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28bQ8CEG5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28bQ8CEG5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28bQ8CEG5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc28bQ8CEG5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28bQ8CEG5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28bQ8CEG5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28bQ8CEG5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28bQ8CEG5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.71■□□□□ 0.43
Ccdc28bQ8CEG5 Gm38205-201ENSMUST00000192243 258 ntBASIC17.71■□□□□ 0.43
Ccdc28bQ8CEG5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.71■□□□□ 0.43
Ccdc28bQ8CEG5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28bQ8CEG5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ccdc28bQ8CEG5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.71■□□□□ 0.43
Ccdc28bQ8CEG5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28bQ8CEG5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28bQ8CEG5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Ccdc28bQ8CEG5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ccdc28bQ8CEG5 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28bQ8CEG5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28bQ8CEG5 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28bQ8CEG5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28bQ8CEG5 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc28bQ8CEG5 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28bQ8CEG5 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28bQ8CEG5 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28bQ8CEG5 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28bQ8CEG5 Dancr-204ENSMUST00000132389 2347 ntBASIC17.7■□□□□ 0.42
Ccdc28bQ8CEG5 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.69■□□□□ 0.42
Ccdc28bQ8CEG5 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.68■□□□□ 0.42
Ccdc28bQ8CEG5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc28bQ8CEG5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc28bQ8CEG5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc28bQ8CEG5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ccdc28bQ8CEG5 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc28bQ8CEG5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc28bQ8CEG5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc28bQ8CEG5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc28bQ8CEG5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc28bQ8CEG5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc28bQ8CEG5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc28bQ8CEG5 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc28bQ8CEG5 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc28bQ8CEG5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc28bQ8CEG5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.67■□□□□ 0.42
Ccdc28bQ8CEG5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc28bQ8CEG5 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc28bQ8CEG5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc28bQ8CEG5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc28bQ8CEG5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc28bQ8CEG5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms