Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp20Q8C6M1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Usp20Q8C6M1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp20Q8C6M1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Usp20Q8C6M1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp20Q8C6M1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.83■□□□□ 0.77
Usp20Q8C6M1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp20Q8C6M1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp20Q8C6M1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.83■□□□□ 0.76
Usp20Q8C6M1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp20Q8C6M1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Usp20Q8C6M1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Usp20Q8C6M1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp20Q8C6M1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.83■□□□□ 0.76
Usp20Q8C6M1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp20Q8C6M1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp20Q8C6M1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp20Q8C6M1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp20Q8C6M1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp20Q8C6M1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp20Q8C6M1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Usp20Q8C6M1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp20Q8C6M1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp20Q8C6M1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp20Q8C6M1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Usp20Q8C6M1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp20Q8C6M1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.81■□□□□ 0.76
Usp20Q8C6M1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp20Q8C6M1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Usp20Q8C6M1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.81■□□□□ 0.76
Usp20Q8C6M1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Usp20Q8C6M1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp20Q8C6M1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.81■□□□□ 0.76
Usp20Q8C6M1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp20Q8C6M1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp20Q8C6M1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp20Q8C6M1 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.81■□□□□ 0.76
Usp20Q8C6M1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Usp20Q8C6M1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Usp20Q8C6M1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp20Q8C6M1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp20Q8C6M1 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.81■□□□□ 0.76
Usp20Q8C6M1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp20Q8C6M1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp20Q8C6M1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp20Q8C6M1 Gm11643-201ENSMUST00000119578 864 ntBASIC19.8■□□□□ 0.76
Usp20Q8C6M1 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.8■□□□□ 0.76
Usp20Q8C6M1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp20Q8C6M1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp20Q8C6M1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp20Q8C6M1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp20Q8C6M1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Usp20Q8C6M1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.8■□□□□ 0.76
Usp20Q8C6M1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp20Q8C6M1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp20Q8C6M1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Usp20Q8C6M1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp20Q8C6M1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp20Q8C6M1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp20Q8C6M1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp20Q8C6M1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Usp20Q8C6M1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Usp20Q8C6M1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.79■□□□□ 0.76
Usp20Q8C6M1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.79■□□□□ 0.76
Usp20Q8C6M1 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.79■□□□□ 0.76
Usp20Q8C6M1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Usp20Q8C6M1 Gm6433-201ENSMUST00000118634 875 ntBASIC19.79■□□□□ 0.76
Usp20Q8C6M1 Gm12382-201ENSMUST00000122005 922 ntBASIC19.79■□□□□ 0.76
Usp20Q8C6M1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.79■□□□□ 0.76
Usp20Q8C6M1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp20Q8C6M1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp20Q8C6M1 Gm30025-201ENSMUST00000218555 728 ntBASIC19.79■□□□□ 0.76
Usp20Q8C6M1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.79■□□□□ 0.76
Usp20Q8C6M1 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.79■□□□□ 0.76
Usp20Q8C6M1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp20Q8C6M1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp20Q8C6M1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp20Q8C6M1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp20Q8C6M1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp20Q8C6M1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp20Q8C6M1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp20Q8C6M1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Usp20Q8C6M1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp20Q8C6M1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.78■□□□□ 0.76
Usp20Q8C6M1 Gm21814-202ENSMUST00000203277 873 ntBASIC19.78■□□□□ 0.76
Usp20Q8C6M1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.78■□□□□ 0.76
Usp20Q8C6M1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp20Q8C6M1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Usp20Q8C6M1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp20Q8C6M1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp20Q8C6M1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp20Q8C6M1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp20Q8C6M1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.77■□□□□ 0.76
Usp20Q8C6M1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp20Q8C6M1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp20Q8C6M1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp20Q8C6M1 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.77■□□□□ 0.76
Usp20Q8C6M1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp20Q8C6M1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp20Q8C6M1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms