Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpne3Q8BT60 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpne3Q8BT60 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.33■□□□□ 0.37
Cpne3Q8BT60 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpne3Q8BT60 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne3Q8BT60 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cpne3Q8BT60 Gm42642-201ENSMUST00000200683 355 ntBASIC17.33■□□□□ 0.36
Cpne3Q8BT60 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.33■□□□□ 0.36
Cpne3Q8BT60 Gm5874-201ENSMUST00000096101 508 ntBASIC17.33■□□□□ 0.36
Cpne3Q8BT60 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.33■□□□□ 0.36
Cpne3Q8BT60 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne3Q8BT60 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne3Q8BT60 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne3Q8BT60 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Cpne3Q8BT60 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.33■□□□□ 0.36
Cpne3Q8BT60 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne3Q8BT60 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne3Q8BT60 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne3Q8BT60 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cpne3Q8BT60 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.32■□□□□ 0.36
Cpne3Q8BT60 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cpne3Q8BT60 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne3Q8BT60 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne3Q8BT60 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne3Q8BT60 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne3Q8BT60 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne3Q8BT60 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne3Q8BT60 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne3Q8BT60 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne3Q8BT60 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne3Q8BT60 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne3Q8BT60 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.32■□□□□ 0.36
Cpne3Q8BT60 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne3Q8BT60 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne3Q8BT60 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne3Q8BT60 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne3Q8BT60 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne3Q8BT60 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cpne3Q8BT60 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.31■□□□□ 0.36
Cpne3Q8BT60 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
Cpne3Q8BT60 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne3Q8BT60 Gm10033-202ENSMUST00000211874 928 ntBASIC17.31■□□□□ 0.36
Cpne3Q8BT60 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne3Q8BT60 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne3Q8BT60 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Cpne3Q8BT60 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne3Q8BT60 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne3Q8BT60 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne3Q8BT60 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne3Q8BT60 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne3Q8BT60 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cpne3Q8BT60 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cpne3Q8BT60 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne3Q8BT60 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne3Q8BT60 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cpne3Q8BT60 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne3Q8BT60 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne3Q8BT60 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cpne3Q8BT60 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne3Q8BT60 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cpne3Q8BT60 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cpne3Q8BT60 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Cpne3Q8BT60 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne3Q8BT60 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne3Q8BT60 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne3Q8BT60 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne3Q8BT60 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne3Q8BT60 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.29■□□□□ 0.36
Cpne3Q8BT60 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne3Q8BT60 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne3Q8BT60 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.29■□□□□ 0.36
Cpne3Q8BT60 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne3Q8BT60 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne3Q8BT60 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne3Q8BT60 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne3Q8BT60 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpne3Q8BT60 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpne3Q8BT60 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpne3Q8BT60 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpne3Q8BT60 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms