Protein–RNA interactions for Protein: Q8BFY9

Tnpo1, Transportin-1, mousemouse

Known RBP Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnpo1Q8BFY9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnpo1Q8BFY9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnpo1Q8BFY9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnpo1Q8BFY9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tnpo1Q8BFY9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tnpo1Q8BFY9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnpo1Q8BFY9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnpo1Q8BFY9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnpo1Q8BFY9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnpo1Q8BFY9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnpo1Q8BFY9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Tnpo1Q8BFY9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnpo1Q8BFY9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnpo1Q8BFY9 Gm6139-201ENSMUST00000079261 882 ntBASIC21.59■■□□□ 1.05
Tnpo1Q8BFY9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnpo1Q8BFY9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC21.59■■□□□ 1.05
Tnpo1Q8BFY9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnpo1Q8BFY9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnpo1Q8BFY9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tnpo1Q8BFY9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tnpo1Q8BFY9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tnpo1Q8BFY9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tnpo1Q8BFY9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Tnpo1Q8BFY9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tnpo1Q8BFY9 Gm43808-201ENSMUST00000202534 2065 ntBASIC21.58■■□□□ 1.05
Tnpo1Q8BFY9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tnpo1Q8BFY9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Tnpo1Q8BFY9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tnpo1Q8BFY9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tnpo1Q8BFY9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.58■■□□□ 1.04
Tnpo1Q8BFY9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC21.57■■□□□ 1.04
Tnpo1Q8BFY9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnpo1Q8BFY9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.57■■□□□ 1.04
Tnpo1Q8BFY9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnpo1Q8BFY9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tnpo1Q8BFY9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.57■■□□□ 1.04
Tnpo1Q8BFY9 Gm27454-201ENSMUST00000185090 204 ntBASIC21.57■■□□□ 1.04
Tnpo1Q8BFY9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Tnpo1Q8BFY9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.57■■□□□ 1.04
Tnpo1Q8BFY9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.57■■□□□ 1.04
Tnpo1Q8BFY9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnpo1Q8BFY9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnpo1Q8BFY9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnpo1Q8BFY9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnpo1Q8BFY9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnpo1Q8BFY9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnpo1Q8BFY9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnpo1Q8BFY9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnpo1Q8BFY9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC21.56■■□□□ 1.04
Tnpo1Q8BFY9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tnpo1Q8BFY9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tnpo1Q8BFY9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tnpo1Q8BFY9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tnpo1Q8BFY9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tnpo1Q8BFY9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tnpo1Q8BFY9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tnpo1Q8BFY9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tnpo1Q8BFY9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tnpo1Q8BFY9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.56■■□□□ 1.04
Tnpo1Q8BFY9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tnpo1Q8BFY9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tnpo1Q8BFY9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnpo1Q8BFY9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnpo1Q8BFY9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Tnpo1Q8BFY9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnpo1Q8BFY9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Tnpo1Q8BFY9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Tnpo1Q8BFY9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnpo1Q8BFY9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.55■■□□□ 1.04
Tnpo1Q8BFY9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Tnpo1Q8BFY9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnpo1Q8BFY9 Idnk-204ENSMUST00000226010 1898 ntBASIC21.55■■□□□ 1.04
Tnpo1Q8BFY9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnpo1Q8BFY9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC21.55■■□□□ 1.04
Tnpo1Q8BFY9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnpo1Q8BFY9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnpo1Q8BFY9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnpo1Q8BFY9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnpo1Q8BFY9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnpo1Q8BFY9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnpo1Q8BFY9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnpo1Q8BFY9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Tnpo1Q8BFY9 Gm13146-201ENSMUST00000118508 780 ntBASIC21.54■■□□□ 1.04
Tnpo1Q8BFY9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Tnpo1Q8BFY9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnpo1Q8BFY9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnpo1Q8BFY9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC21.54■■□□□ 1.04
Tnpo1Q8BFY9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Tnpo1Q8BFY9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnpo1Q8BFY9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
Tnpo1Q8BFY9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnpo1Q8BFY9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnpo1Q8BFY9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnpo1Q8BFY9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnpo1Q8BFY9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Tnpo1Q8BFY9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnpo1Q8BFY9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Tnpo1Q8BFY9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Tnpo1Q8BFY9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tnpo1Q8BFY9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms