Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp8Q80U87 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp8Q80U87 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp8Q80U87 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp8Q80U87 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp8Q80U87 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Usp8Q80U87 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp8Q80U87 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp8Q80U87 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
Usp8Q80U87 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp8Q80U87 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp8Q80U87 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp8Q80U87 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp8Q80U87 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp8Q80U87 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp8Q80U87 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp8Q80U87 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Usp8Q80U87 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Usp8Q80U87 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp8Q80U87 Gm10033-202ENSMUST00000211874 928 ntBASIC17.97■□□□□ 0.47
Usp8Q80U87 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp8Q80U87 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.97■□□□□ 0.47
Usp8Q80U87 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp8Q80U87 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp8Q80U87 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Usp8Q80U87 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp8Q80U87 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp8Q80U87 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp8Q80U87 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp8Q80U87 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp8Q80U87 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Usp8Q80U87 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp8Q80U87 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp8Q80U87 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp8Q80U87 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Usp8Q80U87 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.96■□□□□ 0.47
Usp8Q80U87 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.96■□□□□ 0.47
Usp8Q80U87 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.96■□□□□ 0.47
Usp8Q80U87 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Usp8Q80U87 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.96■□□□□ 0.47
Usp8Q80U87 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp8Q80U87 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Usp8Q80U87 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp8Q80U87 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp8Q80U87 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp8Q80U87 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp8Q80U87 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp8Q80U87 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp8Q80U87 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.95■□□□□ 0.46
Usp8Q80U87 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Usp8Q80U87 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.95■□□□□ 0.46
Usp8Q80U87 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Usp8Q80U87 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp8Q80U87 Gm18671-201ENSMUST00000214826 683 ntBASIC17.95■□□□□ 0.46
Usp8Q80U87 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.95■□□□□ 0.46
Usp8Q80U87 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.95■□□□□ 0.46
Usp8Q80U87 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp8Q80U87 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp8Q80U87 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp8Q80U87 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp8Q80U87 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp8Q80U87 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Usp8Q80U87 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp8Q80U87 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp8Q80U87 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp8Q80U87 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp8Q80U87 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp8Q80U87 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp8Q80U87 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp8Q80U87 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Usp8Q80U87 Gm5874-201ENSMUST00000096101 508 ntBASIC17.94■□□□□ 0.46
Usp8Q80U87 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp8Q80U87 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp8Q80U87 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp8Q80U87 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp8Q80U87 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Usp8Q80U87 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp8Q80U87 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp8Q80U87 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.93■□□□□ 0.46
Usp8Q80U87 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp8Q80U87 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp8Q80U87 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.93■□□□□ 0.46
Usp8Q80U87 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp8Q80U87 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp8Q80U87 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp8Q80U87 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp8Q80U87 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp8Q80U87 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Usp8Q80U87 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.93■□□□□ 0.46
Usp8Q80U87 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp8Q80U87 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Usp8Q80U87 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp8Q80U87 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp8Q80U87 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp8Q80U87 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp8Q80U87 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp8Q80U87 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp8Q80U87 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp8Q80U87 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp8Q80U87 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms