Protein–RNA interactions for Protein: Q80U04

Pja2, E3 ubiquitin-protein ligase Praja-2, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja2Q80U04 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pja2Q80U04 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Pja2Q80U04 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pja2Q80U04 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pja2Q80U04 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pja2Q80U04 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pja2Q80U04 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Pja2Q80U04 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pja2Q80U04 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pja2Q80U04 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pja2Q80U04 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pja2Q80U04 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pja2Q80U04 Reep4-203ENSMUST00000226563 1444 ntBASIC18.82■□□□□ 0.6
Pja2Q80U04 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pja2Q80U04 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pja2Q80U04 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pja2Q80U04 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.81■□□□□ 0.6
Pja2Q80U04 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.81■□□□□ 0.6
Pja2Q80U04 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pja2Q80U04 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pja2Q80U04 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pja2Q80U04 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pja2Q80U04 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pja2Q80U04 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pja2Q80U04 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pja2Q80U04 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pja2Q80U04 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pja2Q80U04 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.81■□□□□ 0.6
Pja2Q80U04 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.81■□□□□ 0.6
Pja2Q80U04 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.81■□□□□ 0.6
Pja2Q80U04 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pja2Q80U04 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pja2Q80U04 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pja2Q80U04 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pja2Q80U04 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pja2Q80U04 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pja2Q80U04 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pja2Q80U04 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pja2Q80U04 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pja2Q80U04 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pja2Q80U04 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pja2Q80U04 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja2Q80U04 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja2Q80U04 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja2Q80U04 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pja2Q80U04 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pja2Q80U04 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.8■□□□□ 0.6
Pja2Q80U04 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.8■□□□□ 0.6
Pja2Q80U04 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja2Q80U04 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja2Q80U04 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja2Q80U04 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja2Q80U04 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja2Q80U04 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.8■□□□□ 0.6
Pja2Q80U04 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja2Q80U04 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pja2Q80U04 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pja2Q80U04 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pja2Q80U04 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pja2Q80U04 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pja2Q80U04 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pja2Q80U04 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pja2Q80U04 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Pja2Q80U04 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Pja2Q80U04 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.79■□□□□ 0.6
Pja2Q80U04 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.79■□□□□ 0.6
Pja2Q80U04 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pja2Q80U04 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.79■□□□□ 0.6
Pja2Q80U04 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pja2Q80U04 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pja2Q80U04 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pja2Q80U04 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pja2Q80U04 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pja2Q80U04 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pja2Q80U04 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pja2Q80U04 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pja2Q80U04 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pja2Q80U04 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pja2Q80U04 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pja2Q80U04 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pja2Q80U04 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.78■□□□□ 0.6
Pja2Q80U04 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.78■□□□□ 0.6
Pja2Q80U04 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pja2Q80U04 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pja2Q80U04 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pja2Q80U04 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pja2Q80U04 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pja2Q80U04 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pja2Q80U04 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pja2Q80U04 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pja2Q80U04 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pja2Q80U04 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pja2Q80U04 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
Pja2Q80U04 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pja2Q80U04 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pja2Q80U04 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pja2Q80U04 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pja2Q80U04 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Pja2Q80U04 Gm22325-201ENSMUST00000158904 308 ntBASIC18.77■□□□□ 0.6
Pja2Q80U04 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms