Protein–RNA interactions for Protein: Q6PDC0

Rundc3b, RUN domain-containing protein 3B, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3bQ6PDC0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rundc3bQ6PDC0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rundc3bQ6PDC0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rundc3bQ6PDC0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rundc3bQ6PDC0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rundc3bQ6PDC0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rundc3bQ6PDC0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rundc3bQ6PDC0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.93■□□□□ 0.3
Rundc3bQ6PDC0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rundc3bQ6PDC0 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.93■□□□□ 0.3
Rundc3bQ6PDC0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.93■□□□□ 0.3
Rundc3bQ6PDC0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rundc3bQ6PDC0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rundc3bQ6PDC0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rundc3bQ6PDC0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rundc3bQ6PDC0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rundc3bQ6PDC0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rundc3bQ6PDC0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.92■□□□□ 0.3
Rundc3bQ6PDC0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rundc3bQ6PDC0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rundc3bQ6PDC0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rundc3bQ6PDC0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rundc3bQ6PDC0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rundc3bQ6PDC0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rundc3bQ6PDC0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rundc3bQ6PDC0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Rundc3bQ6PDC0 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.91■□□□□ 0.3
Rundc3bQ6PDC0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rundc3bQ6PDC0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rundc3bQ6PDC0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rundc3bQ6PDC0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rundc3bQ6PDC0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rundc3bQ6PDC0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rundc3bQ6PDC0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rundc3bQ6PDC0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.91■□□□□ 0.3
Rundc3bQ6PDC0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rundc3bQ6PDC0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rundc3bQ6PDC0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
Rundc3bQ6PDC0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rundc3bQ6PDC0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rundc3bQ6PDC0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rundc3bQ6PDC0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rundc3bQ6PDC0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rundc3bQ6PDC0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.91■□□□□ 0.3
Rundc3bQ6PDC0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rundc3bQ6PDC0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rundc3bQ6PDC0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rundc3bQ6PDC0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rundc3bQ6PDC0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rundc3bQ6PDC0 Gm15546-201ENSMUST00000122095 826 ntBASIC16.9■□□□□ 0.3
Rundc3bQ6PDC0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.9■□□□□ 0.3
Rundc3bQ6PDC0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.9■□□□□ 0.3
Rundc3bQ6PDC0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.9■□□□□ 0.3
Rundc3bQ6PDC0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rundc3bQ6PDC0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rundc3bQ6PDC0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rundc3bQ6PDC0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rundc3bQ6PDC0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Rundc3bQ6PDC0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Rundc3bQ6PDC0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rundc3bQ6PDC0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rundc3bQ6PDC0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rundc3bQ6PDC0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rundc3bQ6PDC0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rundc3bQ6PDC0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rundc3bQ6PDC0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rundc3bQ6PDC0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rundc3bQ6PDC0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rundc3bQ6PDC0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rundc3bQ6PDC0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rundc3bQ6PDC0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Rundc3bQ6PDC0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rundc3bQ6PDC0 Gm5812-201ENSMUST00000061073 957 ntBASIC16.89■□□□□ 0.29
Rundc3bQ6PDC0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Rundc3bQ6PDC0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rundc3bQ6PDC0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rundc3bQ6PDC0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
Rundc3bQ6PDC0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rundc3bQ6PDC0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Rundc3bQ6PDC0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rundc3bQ6PDC0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Rundc3bQ6PDC0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rundc3bQ6PDC0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rundc3bQ6PDC0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rundc3bQ6PDC0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rundc3bQ6PDC0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rundc3bQ6PDC0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rundc3bQ6PDC0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.88■□□□□ 0.29
Rundc3bQ6PDC0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rundc3bQ6PDC0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rundc3bQ6PDC0 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.88■□□□□ 0.29
Rundc3bQ6PDC0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rundc3bQ6PDC0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rundc3bQ6PDC0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rundc3bQ6PDC0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rundc3bQ6PDC0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rundc3bQ6PDC0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rundc3bQ6PDC0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Rundc3bQ6PDC0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rundc3bQ6PDC0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms